Gene Information

Name : Mthe_1412 (Mthe_1412)
Accession : YP_843827.1
Strain : Methanosaeta thermophila PT
Genome accession: NC_008553
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 1514537 - 1514974 bp
Length : 438 bp
Strand : +
Note : PFAM: protein of unknown function DUF163; KEGG: chy:CHY_0058 conserved hypothetical protein TIGR00246

DNA sequence :
ATGCACATGAGGATAATCGCTGTAGGTCGGATCAGAGAGCGGTTCTGGCAGGATGCAGCATCGTACTATCTGAGACGCCT
CTCTCCATACACCAGACTCGATGTTGTGGAGGTTCGCGAGGAGGATCCCATTAAAGAGGGAAGGGGTATACTCGCGCATC
TGTGCGGAGGAGTGACAGTAGCTCTCGATGAGCATGGTGAGAGCATGAGCTCACAGGAGCTGGCGTTGTGGCTCCAGAAC
AGAATCGTTGAGGGATGTGGCAGCATCAACTGGATAATCGGCGGGCCAGAGGGTCTATCTCAGGATGTTCTGAATCGCTC
TGATCTCCAGCTCTCGCTCTCAAAGATGACGTTTCCGTATCAGATGGCGAGAATTCTGCTCCTGGAGCAGCTCTACAGGG
CGTTCAAGATAATAAAAAATGAGCCATACCACCGCTAA

Protein sequence :
MHMRIIAVGRIRERFWQDAASYYLRRLSPYTRLDVVEVREEDPIKEGRGILAHLCGGVTVALDEHGESMSSQELALWLQN
RIVEGCGSINWIIGGPEGLSQDVLNRSDLQLSLSKMTFPYQMARILLLEQLYRAFKIIKNEPYHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 1e-21 45
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 2e-29 42
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 2e-29 42
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 1e-28 42
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 2e-29 42
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 2e-29 42
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 2e-29 42
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 2e-29 42
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 2e-29 42
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 2e-29 42
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 2e-29 42
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-29 42
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 2e-29 42
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-29 42