|
Name : Mthe_1412 (Mthe_1412) Accession : YP_843827.1 Strain : Methanosaeta thermophila PT Genome accession: NC_008553 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG1576 EC number : - Position : 1514537 - 1514974 bp Length : 438 bp Strand : + Note : PFAM: protein of unknown function DUF163; KEGG: chy:CHY_0058 conserved hypothetical protein TIGR00246 DNA sequence : ATGCACATGAGGATAATCGCTGTAGGTCGGATCAGAGAGCGGTTCTGGCAGGATGCAGCATCGTACTATCTGAGACGCCT CTCTCCATACACCAGACTCGATGTTGTGGAGGTTCGCGAGGAGGATCCCATTAAAGAGGGAAGGGGTATACTCGCGCATC TGTGCGGAGGAGTGACAGTAGCTCTCGATGAGCATGGTGAGAGCATGAGCTCACAGGAGCTGGCGTTGTGGCTCCAGAAC AGAATCGTTGAGGGATGTGGCAGCATCAACTGGATAATCGGCGGGCCAGAGGGTCTATCTCAGGATGTTCTGAATCGCTC TGATCTCCAGCTCTCGCTCTCAAAGATGACGTTTCCGTATCAGATGGCGAGAATTCTGCTCCTGGAGCAGCTCTACAGGG CGTTCAAGATAATAAAAAATGAGCCATACCACCGCTAA Protein sequence : MHMRIIAVGRIRERFWQDAASYYLRRLSPYTRLDVVEVREEDPIKEGRGILAHLCGGVTVALDEHGESMSSQELALWLQN RIVEGCGSINWIIGGPEGLSQDVLNRSDLQLSLSKMTFPYQMARILLLEQLYRAFKIIKNEPYHR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ACL99851.1 | hypothetical protein | Not tested | Type-V SCCmec | Protein | 1e-21 | 45 |
| unnamed | BAB72138.1 | open reading frame X | Not tested | Type-IVb SCCmec | Protein | 2e-29 | 42 |
| SAV0024 | NP_370548.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 2e-29 | 42 |
| unnamed | BAC67575.1 | open reading frame X | Not tested | Type-IVc SCCmec | Protein | 2e-29 | 42 |
| unnamed | BAA82243.1 | orfX | Not tested | Type-II SCCmec | Protein | 2e-29 | 42 |
| orfX | AAL26648.1 | unknown | Not tested | SCCcap1 | Protein | 1e-28 | 42 |
| unnamed | BAD24821.1 | conserved hypothetical protein orfX | Not tested | Type-V SCCmec | Protein | 2e-29 | 42 |
| orfX | BAA86653.1 | open reading frame X | Not tested | Type-I SCCmec | Protein | 2e-29 | 42 |
| unnamed | BAG06184.1 | conserved hypothetical protein orfX | Not tested | Type-VII SCCmec | Protein | 2e-29 | 42 |
| unnamed | BAB47681.1 | open reading frame X | Not tested | Type-III SCCmec | Protein | 2e-29 | 42 |
| unnamed | BAC53844.1 | open reading frame X | Not tested | SRImec-III and SCCmec-III region | Protein | 2e-29 | 42 |
| unnamed | BAC57492.1 | hypothetical protein | Not tested | Type-IIIinv SCCmec | Protein | 2e-29 | 42 |
| unnamed | BAB72121.1 | hypothetical protein | Not tested | Type-IVa SCCmec | Protein | 2e-29 | 42 |
| SAR0024 | YP_039501.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 2e-29 | 42 |
