Gene Information

Name : Bcen2424_6857 (Bcen2424_6857)
Accession : YP_840479.1
Strain :
Genome accession: NC_008545
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 71010 - 72572 bp
Length : 1563 bp
Strand : -
Note : PFAM: transposase IS66; KEGG: bte:BTH_I3140 TnpC protein

DNA sequence :
ATGACCACGGCCAACGCCTATCCGGACGACATCGAAGCGCTCAAAGCCTTGTTGCTTGAGCGCGATGCGCGCATCGGTCA
TCTGGAAGATCTGGTCGAATCACACGAAGCCGTGGTGGCCATGGGCAAGGCCGAGATCGAGCACCTGAAGCTGTTGATCG
CGAAGCTGCGCCGTATGGCATTCGGGCGCAGCTCCGAGAAACTGGATCGCCAGATCGAGCAGCTCGAACTGAAACTGGAA
GATCTCGAAGCCGACGAAGGCGCCGCGCTCATCGAGATTCCCAAGGCACCGCGCACGGCACCGGAACAGATACAACGCAA
GCCGCTGCCGGGGTATCTGCCGCGCGACATACGAACGTACCTGCCGGAGTCCGACGAAACCTGCACGGCGTGCGGTGGCG
CAATGAAGCCGCTCGGCGAAGACGTGTCCGAGCAACTGGAATACGTGGCGGCCAGCTTCCGCGTGATTCGCCATGTTCGA
CCGAAACTGGCCTGCACCGGTTGCGATCAGATCGCACAGGCGGCAGCGCCAAGCCGCCCCATCGAACGGGGTCAGGCCGG
CCCGGGACTACTTGCGCATGTGCTCGTGGCGAAGTTCAACGATCATCTGCCGTTGTACCGCCAGTCGGCGATCTACGCCC
GAGAAGGCGTGGAACTGGATCGCTCGTTGCTGGCGAAATGGGTGGGGCACAGTGCCAAGCTACTGCAACCGCTGGTCGAT
GCGCTGCGCCTGCATGTGATGGCAGCCACGAAGCTGCACGCCGACGATACGCCAGTTCCGGTGCTCGCGCCGGGCAATGG
CAAGACGAAAACCGGGCGGCTGTGGGTCTATGTGCGCGATGACCGATACTCGGGCGACAAGGCGCCACCGGCAGTCTGGT
TCGCCTACACCCCTGATCGCAAAGGCGAGCATCCGCAACAGCATCTGGCCAAGTTCAAGGGGACGCTGCAGGCCGATGCC
TATGGCGGCTATCAGAAGATCTACGAGACCGGCAAGGTACTTGAGGCGGCTTGCTGGGCGCATGCCCGGCGCAAGTTCTA
CGATCTGTACGCGGCGCGGCCCAACGCGCTGAACAAGGAAGCGCTGGAACGCATCGGCGCGCTCTACGAGGTCGAAGAAG
CGATCCGGAGCAAACCGCCAGACGAGCGGCAAGCGCACCGGCAGACGAACGCCAAACCATTACTCGAACAGTTCCATGTG
TGGCTAAACGCCGCGCTGGCAACACTCTCGCGCAAATCGGACACGAGTCAGGCCATCCTCTATGTCCTGAACCGGTGGGA
AGCATTGACGCGCTACTGTGACGACGGACAATTGGAAATCGACAATCTGCCGGTCGAGCGGGCACTGCGCGGCGTTGCCC
TGGGTCGACGAAACTACCTGTTCGCCGGCGCGGATTCCGGCGGTGAACGTGCGGCCGCGATTTACAGCCTGATCGGCACG
GCCAAGCTCAATGGTATCGATCCCGAGGCGTACCTGCGTCATGTCCTGGCGCGCATCGCCGATCACCCGATCAACCGAAT
CGACGAACTGCTGCCCTGGACGGTGACCCTTCCCACGCCGTGA

Protein sequence :
MTTANAYPDDIEALKALLLERDARIGHLEDLVESHEAVVAMGKAEIEHLKLLIAKLRRMAFGRSSEKLDRQIEQLELKLE
DLEADEGAALIEIPKAPRTAPEQIQRKPLPGYLPRDIRTYLPESDETCTACGGAMKPLGEDVSEQLEYVAASFRVIRHVR
PKLACTGCDQIAQAAAPSRPIERGQAGPGLLAHVLVAKFNDHLPLYRQSAIYAREGVELDRSLLAKWVGHSAKLLQPLVD
ALRLHVMAATKLHADDTPVPVLAPGNGKTKTGRLWVYVRDDRYSGDKAPPAVWFAYTPDRKGEHPQQHLAKFKGTLQADA
YGGYQKIYETGKVLEAACWAHARRKFYDLYAARPNALNKEALERIGALYEVEEAIRSKPPDERQAHRQTNAKPLLEQFHV
WLNAALATLSRKSDTSQAILYVLNRWEALTRYCDDGQLEIDNLPVERALRGVALGRRNYLFAGADSGGERAAAIYSLIGT
AKLNGIDPEAYLRHVLARIADHPINRIDELLPWTVTLPTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-148 63
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-111 62
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 6e-123 59
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-117 56
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-129 55
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-129 55
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 5e-130 55
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-129 55
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 4e-130 55
tnp AEA34686.1 transposase Not tested Not named Protein 3e-130 55
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-129 55
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 4e-98 55
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 8e-129 54
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-129 54
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 8e-129 54
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 7e-129 54
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 1e-120 53
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 1e-120 53
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-123 52
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-108 50
unnamed AAL08460.1 unknown Not tested SRL Protein 5e-103 48
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 3e-108 48
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 4e-84 44
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 1e-78 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcen2424_6857 YP_840479.1 transposase IS66 VFG1700 Protein 7e-112 62
Bcen2424_6857 YP_840479.1 transposase IS66 VFG0793 Protein 6e-130 55
Bcen2424_6857 YP_840479.1 transposase IS66 VFG1513 Protein 2e-98 55
Bcen2424_6857 YP_840479.1 transposase IS66 VFG1736 Protein 1e-96 52
Bcen2424_6857 YP_840479.1 transposase IS66 VFG1051 Protein 3e-103 48