Gene Information

Name : Bcen2424_3410 (Bcen2424_3410)
Accession : YP_837042.1
Strain :
Genome accession: NC_008543
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 240373 - 241044 bp
Length : 672 bp
Strand : -
Note : TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bcn:Bcen_4757 two component heavy metal response transcriptional regulator, winged helix family

DNA sequence :
ATGCGGATACTGATAGTCGAAGACGAACCCAAGATGGCGTCATACCTCCGGAAGGGGTTGACGGAGGCGAGCTACACGGT
CGATGTCACGGAAAACGGCCAGGACGGCCTGTTCCTCGCCTTGCACGAGGATTTCGACCTGATCGTGCTCGACGTGATGC
TGCCCGCGCTGGACGGCTTCGAGGTGCTCAGGCGGCTGCGCGCGCAGAAGCAGACGCCCGTGCTGCTGCTCACGGCCCGC
GAGGCGATCGAGGACAAGGTCGCCGGGCTCGAACTCGGCGCCGACGATTACCTGCTCAAGCCGTTCGCGTATGCCGAATT
CCTCGCGCGTATCCGCTCGCTGCTGCGCCGCGCGCCACGCAACGTGCGCGACATCCTGCACGTCGCCGATCTCGAAATCG
ACCTGCTCAAGCGTCGCGTGCGGCGCGCGGACACTCGCATCGACCTGACCGCGCAGGAATTCGCGCTGCTGCAGTTGCTC
GCGGAACGCGAAGGCGAGGTGCTGACGCGCACCTTCATCACGTCGCAGATCTGGGACATGAATTTCGACAGCGACACGAA
CGTCGTCGACGCGGCGATCAAGCGCTTGCGCGCGAAGATCGACAACGCGTACGAGAAGAAGCTGATCCACACGATCCGCG
GCATGGGCTACGTGCTCGAGGATCGTTCGTGA

Protein sequence :
MRILIVEDEPKMASYLRKGLTEASYTVDVTENGQDGLFLALHEDFDLIVLDVMLPALDGFEVLRRLRAQKQTPVLLLTAR
EAIEDKVAGLELGADDYLLKPFAYAEFLARIRSLLRRAPRNVRDILHVADLEIDLLKRRVRRADTRIDLTAQEFALLQLL
AEREGEVLTRTFITSQIWDMNFDSDTNVVDAAIKRLRAKIDNAYEKKLIHTIRGMGYVLEDRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-51 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-50 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator BAC0197 Protein 1e-57 63
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator BAC0638 Protein 1e-57 61
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator BAC0083 Protein 2e-58 59
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator BAC0125 Protein 1e-58 59
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator BAC0111 Protein 2e-56 58
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator BAC0308 Protein 4e-52 55
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator BAC0347 Protein 2e-49 54
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator NC_003923.1003417.p0 Protein 2e-35 47
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator NC_013450.8614146.p0 Protein 2e-35 47
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator NC_002951.3238224.p0 Protein 2e-35 47
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator NC_007793.3914065.p0 Protein 2e-35 47
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator NC_002758.1121390.p0 Protein 2e-35 47
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator NC_010079.5776364.p0 Protein 2e-35 47
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator NC_002952.2859858.p0 Protein 2e-35 47
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator NC_007622.3794948.p0 Protein 2e-35 47
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator AE015929.1.gene1106. Protein 1e-28 44
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator HE999704.1.gene1528. Protein 7e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator VFG0596 Protein 2e-51 55
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator VFG1386 Protein 4e-33 44
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator VFG1390 Protein 2e-35 43
Bcen2424_3410 YP_837042.1 two component heavy metal response transcriptional regulator VFG1389 Protein 2e-29 43