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Name : Bcen2424_4856 (Bcen2424_4856) Accession : YP_838483.1 Strain : Genome accession: NC_008543 Putative virulence/resistance : Virulence Product : type III secretion FHIPEP protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 1856536 - 1858755 bp Length : 2220 bp Strand : - Note : PFAM: type III secretion FHIPEP protein; KEGG: bcn:Bcen_3510 type III secretion FHIPEP DNA sequence : ATGGCTGAACCGAAGGCGCTCCCCCGCGACTGGCAGCGGTTGTTTTCCGCCGGCCGCGGCGTGTCCGGACGGCGCCTCGG GGGCGCGTCGCCGCGCGCCGACCTGTTTCTCGCGGCCTTCATCGTCGCGGTCGTCGCGCTGTTCATCCTGCCGCTGCCGC AGGCCGCGCTCGACGGGATGATCTCGCTGAATCTCGCGGCGAGCGTCGTGCTGCTGACGGTGTCGACCTACGTGCCGTCG GCGGTCAGTTTCTCGTCGTTTCCCGCGCTGCTGCTGTTCACGACGCTGTTCCGGCTCGCGCTGAACATCGCGTCGTGCAA GCTGATCCTGCTGCATGCGAACGCCGGCCACGTGATCGACGCGTTCGGGCGGCTGGTGGTCGGCAACAACGTGGTGGTGG GCGGCGTGGTGTTCCTCGTGATCGCGGTCGTGCAGTTCATCGTGATCGCGAAAGGGTCGGAGCGGGTGGCCGAAGTCGGC GCGCGTTTCTCGCTCGACGCGATGCCGGGCAAGCAGATGAGCATCGACGCGGACCTGCGCGCGGGCATCATCAGCGCCGA CGAGGCGCGCGAGCGGCGCGAGAAGCTCGAGCAGGAATCGCAGATGCACGGCGCGATGGACGGCGCGATGAAGTTCGTGA AGGGCGACGCGATCGCGGGCCTCGTGATCGCGTTCATCAACATCGTCGCAGGGATCGCGGTCGGCACGCTGATGCACGGG ATGGACATCGGCGAGGCGCTGCAGCGTTACGCGATCCTGACGGTCGGCGACGGGATGGCGTCGCAGATTCCGTCGCTGCT GGTATCGATCGCGGCCGGCATCGTGACCACGCGCGTCGCGACGCGCGATGCACGACAGCGCCAGCTCGGCGAACAGCTCG GCGAGCAACTGGGCGCACACCCGCGCGCGCTGCTGATCGCGGCGTTCGTGCTGAGCGGTTTTCTCGTCGTGCCCGGTTTT CCGAAATGGTCGTTCGCGCTGATCGCGCTTGGCCTCGGCGCCTTCGCGTTCTCGCAACTGAAGCGCAAGACGTCCGCGCC GAGCTTCAACCTGATTCATGTCGCGGGGCGCGTCGGCGCGGCCGACGACGGCCAGCCCGCGAAGGTATCGCACGCGGCGG GCGTCACGTCGCTGATCGCGGTGTCGCTGTCCGACGACCTGCGCACGGGCCTGAACCTCGCGCAACTGCAGGCGGCGCTG TCGAGCGCGAAGGCGCGCGTCGACGCGGACATCGGCACGGTGTTCCCGCGCATCACGCTGAACGACGACGAGGGCGCGCC GGCCGGTACGTACCGGATCTATCTGCAGGACGTGCTCGTCGCGCACGGCGCGCTGAAGCCGGGCTGGCTGCTGTGGGACG GCGTCGCGCCGCTGCCGGAGCGCGCGGAGCGCCAGCCGGCCGAGGCGTTCGGCCCGTTCGCGACCGCGCTGTGGATCAAG CCCGACGGCGCGGCGCCGGACGGCAAGTGGCTGTCGAGCGAGAGCGCGCTGGCCGCGCACGTCGAGCAGATCGTGCGCCA GCATGCGGACGAACTGCTCGGCATCCAGGAGACGCAGGCGCTCGTGCATCTGGTGCGCCGCGACCATCCGGAGCTGGTGG GCGAACTGACGCGGCTCGTGCCGTTGCAGCGCGTGACCGAAGTGCTGCGCCGGCTGCTCGCCGAACAGGTGCCGATCCGC AACCTGCGCGTGATCTTCGAGAGCCTGATCACGTGGGCGCCGAACGAGCCCGACGACGTGATCGCGCTGGTCGAGCTCGT GCGCGTCGACCTGCGCCGGATGATCACCGATCGACACGCTGGCACGGCGCGCCAGCTGCGGGTCGTGCTGTTCGAGCAGA ACCTGCAGGAGCGGATCGAGAGCGCGGTGATGCGCACGAAGCAGGGTAATTTCCTCGCGCTGTCGAGTGCGGTCAAGCAG GACATCGGCGAACAGGTGCGCGCGATCGTGCAGGCCGCGCAGGCGGCCGGCCCCGGCGGCCACGGCAACGCGCAGGGTGG CGCGCACGGTGGCGCGCGGCTCGCGGTGATGGTCGCGCTCGGCGCGCGCCGCTACGTGAAGACGATCCTGCAGCCGGTGC TGCCCGAACTCGCGGTGCTGTCGTACCAGGAAGTCGAGGAGGACGTGCAGTTGCATACGGTCGGCTGGGTGAAGAACCCG CCGGACGACGGCACGGTCGGCGCGGGCGCCGACGTGCGCGCGCCGGGAGCCGTGCAATGA Protein sequence : MAEPKALPRDWQRLFSAGRGVSGRRLGGASPRADLFLAAFIVAVVALFILPLPQAALDGMISLNLAASVVLLTVSTYVPS AVSFSSFPALLLFTTLFRLALNIASCKLILLHANAGHVIDAFGRLVVGNNVVVGGVVFLVIAVVQFIVIAKGSERVAEVG ARFSLDAMPGKQMSIDADLRAGIISADEARERREKLEQESQMHGAMDGAMKFVKGDAIAGLVIAFINIVAGIAVGTLMHG MDIGEALQRYAILTVGDGMASQIPSLLVSIAAGIVTTRVATRDARQRQLGEQLGEQLGAHPRALLIAAFVLSGFLVVPGF PKWSFALIALGLGAFAFSQLKRKTSAPSFNLIHVAGRVGAADDGQPAKVSHAAGVTSLIAVSLSDDLRTGLNLAQLQAAL SSAKARVDADIGTVFPRITLNDDEGAPAGTYRIYLQDVLVAHGALKPGWLLWDGVAPLPERAERQPAEAFGPFATALWIK PDGAAPDGKWLSSESALAAHVEQIVRQHADELLGIQETQALVHLVRRDHPELVGELTRLVPLQRVTEVLRRLLAEQVPIR NLRVIFESLITWAPNEPDDVIALVELVRVDLRRMITDRHAGTARQLRVVLFEQNLQERIESAVMRTKQGNFLALSSAVKQ DIGEQVRAIVQAAQAAGPGGHGNAQGGAHGGARLAVMVALGARRYVKTILQPVLPELAVLSYQEVEEDVQLHTVGWVKNP PDDGTVGAGADVRAPGAVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | AAP34346.1 | HrcV | Virulence | Hrp PAI | Protein | 1e-61 | 41 |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 1e-61 | 41 |
| hrcV | NP_640760.1 | HrcV protein | Virulence | Hrp PAI | Protein | 3e-62 | 41 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 8e-62 | 41 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 5e-86 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bcen2424_4856 | YP_838483.1 | type III secretion FHIPEP protein | VFG0064 | Protein | 4e-84 | 41 |
