Gene Information

Name : Bcen2424_3315 (Bcen2424_3315)
Accession : YP_836949.1
Strain :
Genome accession: NC_008543
Putative virulence/resistance : Virulence
Product : type IV secretion/conjugal transfer ATPase
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 149490 - 151970 bp
Length : 2481 bp
Strand : +
Note : TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE, TrbE, VirB component of type IV transporter system; KEGG: bcn:Bcen_4851 type IV secretion/conjugal transfer ATPase, VirB4 family

DNA sequence :
ATGAGCACACCGTCGGCACACGCAACCCTCGTACCGCGCGAAGTGGTGCTCGCAGATTTCATCCCATTTTCGTCGCATGT
CACGGACCGCGTGATTCGCACACGCGAGGGTGACTATATACAAATCTGGAAAATTCCCGGGATTGCATTCGAGACGGCCG
ATCCTGCCGATATTCTCGCGCGCCATGTCACCTTCAATCAGCTGGTGCGCAATCTGCCGGGTGGCCACGTCGCGCTATGG
ACGCATCGGCTGCGGCGGCGTACCGCGGACAGGTTCGAGACGACCTATCTCAACCGATTCTGTCAGGACTTAGCTGAGCG
CTACTACGCGAGCTTTGCCGGTTACACGATGATGACCAACGAGCTCTACGTGAGCGCCGTATATCGTCCTCACCGGACGC
GATTGGGGCGGCTGTTCAGCCGTGCAGCACGCCGTACAGTTGACGACATTCAGCGCGATCAGCAAGACGCATTGCGTGCG
CTGGCCGATATCGCCGCGCAGATCGAGACTGGTCTCAAACCGTGGTCGCCATGCGCGCTCGGTGTGTATGAACGCCGCGA
TCCATTGACCAAGCGGCTCTGTCGCTATTCCGCCGCGCTCGAGATGCTTGGTTACCTAGTCAACGGAACGTGGGAGGCGG
TACCGGTTGGATACGGTCGAATTTGCGACACGTTACCAACCTCGCGCCTGTTCTTCCACCGTGAGAAGCTCGAGATCCGC
ACACCTACGCGCACCCGCTATGCGGCGTTGCTCGACCTGAAGGACTATCCGGAGCAAACCGAGCCAGGCATGCTCAATGG
ATTGCTCTACGGCGACTTCGAGTACATCGAAACGCAAAGCTTTACCGTGCTTGACCGTCCCAGTGCCAAGGAGGCGCTCG
AGCGCCAGCGCAACCAACTGATTGCGGGAGATGACGTTGCTGTCTCGCAAATCGAGGCAATGGATCAGGCCGCGAACGAT
CTCGTCAATGGCGATTTTGTTTTGGGCGAGTACCACTACACGTTGGCTGTGCTGGGAGATACCTTGGATGAGGTAGTGCG
GCATGTCGCCCAAGCACGAACGAAGCTTGCAGACGCCGGCTTCCAGAGTGCGCTCATTGATCTGGTCGCCGATGCTGCGT
GGTTCGCGCAGTGCCCCGGCAACTGGCGATACCGACCGCGAGAGGCGAAGCTCACATCACGCAACTTTTGCGCGATGGCC
AGTTTGCATAATTTCGCGACTGGAAAGCGAGAGGGTAATCCGTGGGGCGAAGCTATCACGATTGTCAAAACGCCCAGCGG
GCAACCGCTCTATCTGAATTTTCACGCGACGCCCGAGAAAGTCGACTCAAACGACGAGAAGGCGCTTGCCAACACGCAGA
TCATCGGCCGAGCCGGTGCAGGCAAGACTGTGCTTGAACTGTTTCTGCTCGCGATGGCAATGAAGTACGGTGTGATGGGC
GTGCTCTTCGACAAGGACCGAGGAGCGGAAATCGGGATTCGCGCCATGGGTGGTCAATACACGGTATTTCACCGTGGTGA
GCCCACCGGCATGAACCCGTTCCAGTTGGAGGCGGACGAGGCGACACACAGTTTTTGGATGCGTCTCGTGTGCAAGCTGG
TCGACAACGGAGTACCGCTGTCCGCGAAGGATGAGCTCGATATCTCTCGCGCGATCCGGGAGGTTGCACGCATGGATCGA
TCGCTGCGTCGGTTGTCCATGGTCAGGCAACTGTTGCCAAACGTTGGAGATAACAGTCTTCATGCGCGGCTTGCCAAATG
GTGCGCCGGCGGGCGCCTCGGGTGGGTGCTCGATAACCCGGTTGACCGGATTGATCTAGATGCGCACCGATTGTTCGGTT
TTGACGACACAGAACTGCTCGACGATCCGGAGGTATGTGCGCCACTGACGATGGTGCTGCTGCATCTGACCGAACGCCTG
ATCGATGGGCGGCGTTTCATCTATGTGATGACCGAGTTCTGGAAGCGCCTGCGCGACCCGGTGTTCAGCGAGTTTGCCAA
CGACAAGCAAAAGACCATTCGCAAGCAAAACGGCCTAGGTATTTTCGATACCCAGTCCCCTGCGGATGTGCTTAGCAGTC
CAATCTCTCGTGCGCTTGTAGAGCAGACGGCTACATTTTTCTTCCTCCCCAACCCGAGCGCAGACCACGATGATTATGTC
CACGGTTTCAAGCTGACCGAAGCAGAATTCAACATTGTGAGACGCATGGGTGAGCACAGCCGGCTGTTCTTGGTCAAGCA
GGGTCATCGTTCGGCAATCGGGCGACTCGATCTCTCGGGAATGGGCGACGTGCTCGATGTCCTGTCGGGCACGTCAGACA
ATGTTGCGTTGCTCAATACGATCCGGGCCAAGGTCGGGGACGACCCCGATGTGTGGTTGCCGCGCTTTCATGATGCCCTG
ACTGCTCGCCGGCGCCAGACGAGTGCGTTTCAAACCGCATTGTCGAGCACCGCTACACACGCGCAAGGTGGTGTTCTATG
A

Protein sequence :
MSTPSAHATLVPREVVLADFIPFSSHVTDRVIRTREGDYIQIWKIPGIAFETADPADILARHVTFNQLVRNLPGGHVALW
THRLRRRTADRFETTYLNRFCQDLAERYYASFAGYTMMTNELYVSAVYRPHRTRLGRLFSRAARRTVDDIQRDQQDALRA
LADIAAQIETGLKPWSPCALGVYERRDPLTKRLCRYSAALEMLGYLVNGTWEAVPVGYGRICDTLPTSRLFFHREKLEIR
TPTRTRYAALLDLKDYPEQTEPGMLNGLLYGDFEYIETQSFTVLDRPSAKEALERQRNQLIAGDDVAVSQIEAMDQAAND
LVNGDFVLGEYHYTLAVLGDTLDEVVRHVAQARTKLADAGFQSALIDLVADAAWFAQCPGNWRYRPREAKLTSRNFCAMA
SLHNFATGKREGNPWGEAITIVKTPSGQPLYLNFHATPEKVDSNDEKALANTQIIGRAGAGKTVLELFLLAMAMKYGVMG
VLFDKDRGAEIGIRAMGGQYTVFHRGEPTGMNPFQLEADEATHSFWMRLVCKLVDNGVPLSAKDELDISRAIREVARMDR
SLRRLSMVRQLLPNVGDNSLHARLAKWCAGGRLGWVLDNPVDRIDLDAHRLFGFDDTELLDDPEVCAPLTMVLLHLTERL
IDGRRFIYVMTEFWKRLRDPVFSEFANDKQKTIRKQNGLGIFDTQSPADVLSSPISRALVEQTATFFFLPNPSADHDDYV
HGFKLTEAEFNIVRRMGEHSRLFLVKQGHRSAIGRLDLSGMGDVLDVLSGTSDNVALLNTIRAKVGDDPDVWLPRFHDAL
TARRRQTSAFQTALSSTATHAQGGVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwK YP_001610476.1 TrwK protein Virulence Not named Protein 9e-167 44
trwK CAD42844.1 TrwK protein Not tested trw-PAI Protein 6e-167 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcen2424_3315 YP_836949.1 type IV secretion/conjugal transfer ATPase VFG2211 Protein 0.0 48
Bcen2424_3315 YP_836949.1 type IV secretion/conjugal transfer ATPase VFG2259 Protein 1e-167 44
Bcen2424_3315 YP_836949.1 type IV secretion/conjugal transfer ATPase VFG0018 Protein 9e-153 42