Gene Information

Name : Bcen2424_0960 (Bcen2424_0960)
Accession : YP_834606.1
Strain :
Genome accession: NC_008542
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 3.5.4.26
Position : 1066110 - 1067231 bp
Length : 1122 bp
Strand : -
Note : KEGG: bcn:Bcen_0481 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein

DNA sequence :
ATGTTCTCGGATACCGATTTCGCCCACATGCAGCGCGCGCTCGCGCTCGCGGCGCGCGGCATGTACACGACCGCGCCGAA
TCCGCGCGTCGGCTGCGTGATCGTCAAGGACGGCGACGTGATCGGCGAAGGCTTCACGCAGCCGGCCGGCCAGGACCACG
CGGAAGTGCAGGCGCTCAAGGACGCGCGTTCGCGCGGCTACGACGTCGCGGGCTCCACCGTCTACGTGACGCTCGAACCG
TGCAGCCATTTCGGCCGCACGCCGCCGTGCGCGAACGCGCTGATCGACGCGCGCGTCGCGAAGGTCGTCGCCGCGATGGA
AGACCCGAACCCGCAGGTGTCGGGGCGCGGCCTCGGAATGCTGCGCGACGCGGGTATCGACGTGCGCTGCGGGCTGCTCG
CGCATGAAGCCGGCGAGCTGAACATCGGCTTCGTGTCGCGGATGACGCGCGGCCGCCCGTGGGTGCGGATGAAAACCGCC
GCGTCGCTCGACGGCCGCACCGCGCTGCCGTCCGGCGAAAGCCAGTGGATCACCGGCGAGGCCGCGCGCCTCGACGGCCA
TGCGTGGCGCGCCCGTGCGTGCGCGATCCTCACCGGTATCGGCACCGTGCGCGAGGACAATCCGCTGCTGACCGTGCGCG
GCATCGACACGCCGCGCCAGCCGCAACGCATCCTGGTGGACAGCCGCCTCGACCTGCCGCTCGACGCGCGGCTGCTCGAA
GGCGCGCCATTGCTGATCTTCTGCGGCCGGCTCGACGCCGCCGGCGAACTGCGCGCGAACGTGCTGAAGTCGCGCGGCGC
GGAAATCGTGCCGCTCGCGAATGCGCACGGCAAGGTCGACCTGCCCGCGATGCTGGCGGCGCTCGGCGCGCGCGGCGTCA
ACGAGCTGCACGTCGAGGCCGGCCACAAGCTGAACGGTTCGCTGCTGCGCGAACGCTGCGTCGACGAATTGCTGGTGTAT
CTGGCGCCGAGCCTGCTGGGCGCCGACGCGGCCGGCATGTTCGATCTCGCCGCGCCGGCCAGCCTCGAGGCGCGCACCCG
GCTGTCGTTCCACGGTATCGAGCGGGTCGGCGACGACCTGCGCATCCTCGCGCGCGTCGCACCGACCGACACGTCTCACT
GA

Protein sequence :
MFSDTDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGDVIGEGFTQPAGQDHAEVQALKDARSRGYDVAGSTVYVTLEP
CSHFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRCGLLAHEAGELNIGFVSRMTRGRPWVRMKTA
ASLDGRTALPSGESQWITGEAARLDGHAWRARACAILTGIGTVREDNPLLTVRGIDTPRQPQRILVDSRLDLPLDARLLE
GAPLLIFCGRLDAAGELRANVLKSRGAEIVPLANAHGKVDLPAMLAALGARGVNELHVEAGHKLNGSLLRERCVDELLVY
LAPSLLGADAAGMFDLAAPASLEARTRLSFHGIERVGDDLRILARVAPTDTSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-59 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-59 44