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Name : Bcen2424_0061 (Bcen2424_0061) Accession : YP_833708.1 Strain : Genome accession: NC_008542 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 60284 - 61783 bp Length : 1500 bp Strand : - Note : KEGG: bcn:Bcen_0009 type II secretion system GspE; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : GTGAGCGACGTGCTCGCGTCCTCCGCCCACGACGGCGCGCCGGGCGAACGCCAGCCGCCGTCGCCGCTCGCCGCGCGCCT GCTGCCGTACGGCTTCGCGAAGAGCGGCCAGGTGCTGATCGCGCATCAGCTCGACGACACGCTCGAGGTATGGATCAGCG AACGCACGAGCGACGCCGCGCTCGCGGAGATCGCGCGCAACTTCGGCTCGATCGCCGTGCATCGCGTGCCGGCCGACGAG CTCGCACAGGCGATCAACCAGGCCTACGCACGCCAGGACGGCAGCGCCGCGCAGGTGGTCGGCGAGGTCGAAGGCGAAGT CGACCTGTCGCGGCTGATGCAGGACATTCCCGAAGTCGAGGATCTGCTCGAATCGGAAGACGATGCGCCGATCATCCGGA TGATCAACGCGCTGCTCACGCAAGCGGCGCGCGAACAGGCATCGGACATTCACATCGAGCCATTCGAGAATGCGTCGGTC GTGCGCTTTCGCGTCGACGGCACGCTGCGCGACGTCGTGCGCCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGGAT CAAGATCATGGCGCAGCTCGACATCGCGGAGAAGCGTCTGCCGCAGGACGGCCGCATCACGCTGCGCGTCGGCGGCCGGC CGGTCGACGTGCGGGTGTCGACGCTGCCGACCGGGCACGGCGAGCGCGCGGTGCTGCGTCTGCTCGAAAAGGATGCGCAG CGCCTGAACCTCGAAGCGCTCGGGATGGGCCGCGACACGCTCGTCCAGTTCGACAAGCTGATCGGCCGCCCGCACGGCAT CGTGCTCGTCACCGGCCCGACCGGTTCGGGCAAGACGACCACGCTGTACGCGTCGATGTCGCGGCTCGAAACCGCGACGA CCAACATCATGACCGTCGAGGACCCGATCGAATACGACCTGTCCGGCATTGGCCAGACGCAGGTGAACGAGCGAATCGGG ATGACCTTTGCCCGCGCGCTGCGCTCGATTCTGCGCCAGGACCCGGACGTGATCATGATCGGCGAAATCCGCGACCTCGA AACCGCGCAGATCGCGGTGCAGGCGTCGCTGACGGGCCACCTCGTGCTCGCGACGCTGCACACGAACGACGCGGCGTCCG CCGTCACGCGCCTGACCGACATGGGCGTCGAGCCGTACCTGCTCGCGTCGTCGCTGCTCGGCGTGCTCGCGCAGCGCCTG GTGCGCCAGCTCTGCCCGGTCTGCAAGGAAGAGCGGCATGAGGACGGCCGTACCGTATGGCATCCGGTCGGTTGCGCGAA GTGCGGACATTCCGGTTATGCGGGCCGGCGCGGTGTGTACGAGCTGCTGGTGATCGACGATTCGATCCGCTCGCTGATTC ACCGCAACGCGGCCGATGCTGAAATTCTCGCCGCCGGCCGCGCGGAAGGCATGCGCACGCTGCGCGACGACGCCGAGCGC TGGCTCGCGTCCGGCGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCATAG Protein sequence : MSDVLASSAHDGAPGERQPPSPLAARLLPYGFAKSGQVLIAHQLDDTLEVWISERTSDAALAEIARNFGSIAVHRVPADE LAQAINQAYARQDGSAAQVVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASV VRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQ RLNLEALGMGRDTLVQFDKLIGRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIG MTFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRL VRQLCPVCKEERHEDGRTVWHPVGCAKCGHSGYAGRRGVYELLVIDDSIRSLIHRNAADAEILAAGRAEGMRTLRDDAER WLASGATSLEEVLRVTGGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-116 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-116 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bcen2424_0061 | YP_833708.1 | general secretory pathway protein E | VFG0182 | Protein | 1e-123 | 56 |
| Bcen2424_0061 | YP_833708.1 | general secretory pathway protein E | VFG2048 | Protein | 1e-115 | 53 |
| Bcen2424_0061 | YP_833708.1 | general secretory pathway protein E | VFG1876 | Protein | 6e-117 | 52 |
| Bcen2424_0061 | YP_833708.1 | general secretory pathway protein E | VFG2426 | Protein | 1e-77 | 49 |
| Bcen2424_0061 | YP_833708.1 | general secretory pathway protein E | VFG0233 | Protein | 3e-86 | 49 |
