Gene Information

Name : Bcen2424_1223 (Bcen2424_1223)
Accession : YP_834868.1
Strain :
Genome accession: NC_008542
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1352507 - 1354438 bp
Length : 1932 bp
Strand : -
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGAACGCCAATCCGAAGTTTCTGTCTGCCGACGCGCACGTCGACGCCGCCGCCGTCGCGCCGCTGCCCAATTCGCGAAA
GGTCTATGTAACCGGCTCGCAGCCCGACATCCGCGTGCCGATGCGCGAAATCACGCAGGCCGACACGCCGACCGGCTTCG
GCGGCGAGAAGAATCCGCCGATCTACGTGTACGACACGTCGGGCCCCTACACCGATCCGGACGCGAAGATCGACATCCGC
GCGGGCCTGCCCGCACTGCGCCAGCGCTGGATCGAGGCGCGCGGCGACACCGAAGTGCTCCCCGGCCTGTCGAGCCAGTA
CGGCCTCGAACGCGCGGCCGATCCGGCCACGGCCGAACTTCGCTTTCCAGGCCTGCACCGCAATCCGCGCCGTGCGCAGC
CCGGCAAGAACGTCACGCAGATGCACTACGCGCGTCAGGGCATCATCACGCCGGAAATGGAATACATCGCGATCCGCGAG
AACCAGCGCCGCGCCGAGTACATCGAGAGCCTGAAGTCGAGCGGCCCGAACGGCGCGAAGCTCGCCGCGATGATGGGCCG
CCAGCATCCGGGCCAGGCGTTCGGCGCCGCGGCCTTCGGCGCGAACGCGCTCGCCGAGATCACGCCGGAATTCGTGCGCG
ACGAAATCGCGCGCGGCCGCGCGATCATCCCGGCGAACATCAACCACCCGGAATCCGAGCCGATGATCATCGGCCGCAAC
TTCCTCGTGAAGATCAACGCGAACATCGGCAACTCGGCGGTCACGTCGTCGATCGGCGAGGAAGTCGACAAGATGACGTG
GGCGATCCGCTGGGGCGGCGACACGGTGATGGATCTGTCGACCGGCAAGCACATCCATGAAACGCGCGAGTGGATCATCC
GCAACAGCCCGGTGCCGATCGGCACGGTGCCGATCTACCAGGCGCTCGAAAAGGTCAACGGCAAGGCCGAGGACCTCACC
TGGGAAATCTTCCGCGACACGCTGATCGAGCAGGCCGAGCAAGGCGTCGACTACTTCACGATCCACGCGGGCGTGCGCCT
GCAGTACGTGCCGCTCACCGCGAACCGGATGACGGGCATCGTGTCGCGCGGCGGCTCGATCATGGCGAAGTGGTGCCTCG
CGCATCACAAGGAAAGCTTCCTGTACGAACACTTCGAAGAGATCTGCGAGATCATGAAGGCGTACGACGTGAGCTTCTCG
CTCGGCGACGGCCTGCGTCCCGGCTCGATCTACGACGCGAACGACGAAGCGCAGCTCGGCGAACTGAAGACGCTCGGCGA
ACTCACGCAGATCGCGTGGAAGCACGACGTGCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCAACTGATCAAGG
AGAACATGGATCTCCAGCTCGACTGGTGCAAGGAAGCGCCGTTCTACACGCTCGGGCCGCTCACCACCGACATCGCGCCG
GGTTACGACCACATCACGTCGGGCATCGGCGCCGCGATGATCGGCTGGTTCGGCACCGCGATGCTGTGCTACGTGACGCC
GAAGGAACACCTCGGCCTGCCGAACAAGGACGACGTGAAGGAAGGCATCATCACGTACAAGCTCGCCGCGCACGCCGCCG
ACCTGGCCAAGGGTCACCCGGGCGCGCAGGTGCGCGACAACGCGCTGTCGAAGGCGCGCTTCGAGTTCCGCTGGGAAGAC
CAGTTCAACATCGGTCTCGACCCGGACAAGGCGCGCGAATTCCACGACGAGACGCTGCCGAAGGATTCCGCCAAGGTCGC
GCACTTCTGCTCGATGTGCGGCCCGCACTTCTGCTCGATGAAGATCACGCAGGACGTGCGCGAGTTCGCGGCGCAGCAGG
GCGTGTCGGAAACCGAAGCGCTGAAGAAAGGGATGGAGGTCAAGGCGGTCGAGTTCGTGAAGACCGGCGCCGAGATCTAC
CACCGTCAGTAA

Protein sequence :
MNANPKFLSADAHVDAAAVAPLPNSRKVYVTGSQPDIRVPMREITQADTPTGFGGEKNPPIYVYDTSGPYTDPDAKIDIR
AGLPALRQRWIEARGDTEVLPGLSSQYGLERAADPATAELRFPGLHRNPRRAQPGKNVTQMHYARQGIITPEMEYIAIRE
NQRRAEYIESLKSSGPNGAKLAAMMGRQHPGQAFGAAAFGANALAEITPEFVRDEIARGRAIIPANINHPESEPMIIGRN
FLVKINANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLT
WEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTANRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEEICEIMKAYDVSFS
LGDGLRPGSIYDANDEAQLGELKTLGELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLDWCKEAPFYTLGPLTTDIAP
GYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGAQVRDNALSKARFEFRWED
QFNIGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVREFAAQQGVSETEALKKGMEVKAVEFVKTGAEIY
HRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 75
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 75
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 74