|
Name : Bcen2424_0979 (Bcen2424_0979) Accession : YP_834625.1 Strain : Genome accession: NC_008542 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1088333 - 1089634 bp Length : 1302 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGACATCCAGTTGCTGCGCAAAGACCTCGACGGCGTCGCCAAGCGCCTCGCCGATCGCGGCTACACCCTCGACGT CGCCGCGTTCTCCGCACTCGAAGCGGAACGCCGCGCGATCCAGACCCACACCGAAGAGCTCCAGGCGCGCCGCAACAGCC TGTCGAAGCAGATCGGCGCGATGAAGGGCAAGGGCGAGGACACGTCGGCCGTGATGGCCGAGGTCGGCGGGATCGGCGAC GACATGAAGGCGTCGGAAGCCAAGCTCGGCGAGATCCAGGCGCGCCTGTCCGACCTGATGCTGGGCATGCCGAACGTCGC GCACGAGAGCGTGCCGGTCGGCAAGGACGAAGCCGACAACGTCGAGGCGCGCCGCTGGGGCACGCCGCGCCAGTTCGACT TCGAGGTGAAGGATCACGTCGACGTCGGCACGCCGCTCGGCCTCGATTTCGAGACGGGCGCGAAGCTCGCCGGCGCGCGC TTCACGATGCTGCGCGGCCCGATCGCGCGCCTGCACCGCGCCCTCGCGCAGTTCATGATCGACACGCACACGCAGCAGCA CGGCTATACCGAAACGTACACGCCGTACATCGTGAACCCGGAGATCCTGTACGGCACGGGCCAGTTGCCGAAATTCGCGG ACGACATGTTCCGCGTCGAGAAGGGCGGCGCGGAAAACACGGTCACGCAATACCTGATCTCCACGTCCGAGATTTCGCTG ACGAACACCGTGCGCGAGTCGATCGTCGACGCGTCCGCGCTGCCGATCAAGCTCACCGCGCATTCCCCGTGCTTCCGTTC GGAAGCCGGTTCGTACGGCCGCGACACGCGCGGGATGATCCGTCAGCACCAGTTCGACAAGGTCGAGATGGTGCAGGTCG TCGCGCCGGAAACATCGTACGCGGCACTCGACGAGATGGTCGGCCACGCGGAAGCGATCCTGCAGAAGCTCGGCCTGCCG TACCGCGTGATCACGCTGTGCACGGGCGACATGGGCTTCTCGGCCGCGAAGACGTTCGACCTCGAGGTGTGGCTGCCCGC GCAGAACACCTATCGCGAGATCTCGAGCTGCTCGAACACCGAGGCGTTCCAGGCGCGCCGGATGCAGGCGCGGTTCCGCA ACGCGCAGGGCAAGCCGGAGCTCGTGCATACGCTGAACGGTTCGGGTCTGGCGGTCGGCCGCACGCTCGTCGCGGTGCTG GAGAACTACCAGAACGCGGACGGCTCGGTCACGGTGCCGGAAGTGCTGCGTCCGTACATGGGCGGCATGGAGCGGATCGA CGCGCCGGCACAGGCGTCCTAA Protein sequence : MLDIQLLRKDLDGVAKRLADRGYTLDVAAFSALEAERRAIQTHTEELQARRNSLSKQIGAMKGKGEDTSAVMAEVGGIGD DMKASEAKLGEIQARLSDLMLGMPNVAHESVPVGKDEADNVEARRWGTPRQFDFEVKDHVDVGTPLGLDFETGAKLAGAR FTMLRGPIARLHRALAQFMIDTHTQQHGYTETYTPYIVNPEILYGTGQLPKFADDMFRVEKGGAENTVTQYLISTSEISL TNTVRESIVDASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQVVAPETSYAALDEMVGHAEAILQKLGLP YRVITLCTGDMGFSAAKTFDLEVWLPAQNTYREISSCSNTEAFQARRMQARFRNAQGKPELVHTLNGSGLAVGRTLVAVL ENYQNADGSVTVPEVLRPYMGGMERIDAPAQAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-104 | 57 |
