Gene Information

Name : Arth_3954 (Arth_3954)
Accession : YP_833429.1
Strain : Arthrobacter sp. FB24
Genome accession: NC_008541
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4468114 - 4468890 bp
Length : 777 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: nfa:nfa32290 putative short chain dehydrogenase

DNA sequence : 
ATGAGCACCACCATCCAGCGCACCGCCGTCCTCACGGGGGCCACTTCGGACCGCGGCATCGGCATCACCACCGCACGCCG
CTACGCCAACCAGGGCTGGGCGGTGGTGATCCTGGACCTCGACGGCGAGAAATCCGCCAAGGTCGCCGCCGAAATCGGCA
ACGAGTTCAACGTCCCCGCCTTCGGCCACGAGATCGACGTCGCCAATGAGGGCTCCGTCAACGCCGCCTATGCAGCCGTC
GCCGCAGAAGTCGCCGCCGGCAACCTTCCCCCCGTGGGCGCGCTGGCCAACATTGCCGGCATCACCTCGCCGGTGCCGTT
CCTGGAAACCACCCTGGAGCTCTGGCACAAGGTGATGGACGTCAACGCCACCGGAACCTACCTGGTCACCAAGGCCTTCC
TGCCGGACATGATTGCCAGCGGCTGGGGCCGGATTGTGAACATGTCCTCCGTCTCCGCGCAGCGCGGCGGCGGCGTCTTC
GGCAAGGTCCCCTACTCCGCCGCCAAGGCAGCCATCCTGGGCTTCACCAAGGCGCTCGCCCGCGAAATCGGCGCCACCGG
CGTGACCGTCAACGCGATCACCCCGGGCGCCGTGGACACCAACATCCGCGTGGGCAGCACCGAGGAGCAGGAGGCCGCCA
TCAACGCCGGCATCCCCCTGGGCCGCAACGCCACCACCGAGGAAATCGCCGCCGTCATCACATTCCTGTCCTCCGAGGAA
TCGGCCTACCTCACGGGAACCACCATCGACATCAACGGCGGAAGCCACATCCACTAG

Protein sequence : 
MSTTIQRTAVLTGATSDRGIGITTARRYANQGWAVVILDLDGEKSAKVAAEIGNEFNVPAFGHEIDVANEGSVNAAYAAV
AAEVAAGNLPPVGALANIAGITSPVPFLETTLELWHKVMDVNATGTYLVTKAFLPDMIASGWGRIVNMSSVSAQRGGGVF
GKVPYSAAKAAILGFTKALAREIGATGVTVNAITPGAVDTNIRVGSTEEQEAAINAGIPLGRNATTEEIAAVITFLSSEE
SAYLTGTTIDINGGSHIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-37 45
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 7e-38 45
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 7e-38 45
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-38 45
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-37 44