Gene Information

Name : Arth_3818 (Arth_3818)
Accession : YP_833293.1
Strain : Arthrobacter sp. FB24
Genome accession: NC_008541
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4302692 - 4305265 bp
Length : 2574 bp
Strand : -
Note : PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: sco:SCO6408 clp protease ATP binding subunit

DNA sequence :
ATGCCAACGTTTTTTGGACCTGCCGGTACCGGCAGCGGTTCGTTTGACGAGTTCCTCGCGCGCTACCTGCAGGGCCAGCG
CGCTGCCCGGTCCGGGCGCCCCACGGACATCACCCGGCTGCTGAGCCGCCGCACCCATGAAGTGCTCTCGCTCGCCGGCC
AGTTCGCCGTGGACCTCGGACACGGCGATGTGGATGCCCTGCATATCCTGCGGACCATGGCCGGGGCGGAACCGGCCACC
AGCTACATGCGCCGCGCCGGGGCCGACCCCGCGGCAGTTGCCAGGGCAGCCGAAGAACGCCTGCCGGAGAAATCCGGCCG
GGCGGCGACAAGCGCCCCTGCGCTGACGCCGTCCGCGCAGCGCGCACTGCTCGATGCCTACCAGGTAGCCCGGGCGTTCG
GGTCCACCTACATCGACCCGGAGCACCTCTTCTTCGCCCTGGTGCTCAACCAGGACGCCCCCGCCGGGCAGGTGCTCGCT
GCGGCCGGCGTCACGCCGGAGTCCTTCCAGGCCGGGGCGCGCGAAACTTCCGGTACCGAGCCGTCCGGAGCCGGCGCACC
GGACGCTGCAGCATCCGCAAGCGGTACCGGCACCGCGGCGGCGACCCCGATGCTGGACACCTACGGGACTGACCTGACGG
CCCTGGCGCGCTCAGGCGGCCTTGACCCGGTCATCGGGCGCTCCGACGAAACAGCCCAGACCATTGAGGTCCTCGCCCGG
CGCACCAAGAACAATCCGGTGCTGATCGGCGAAGCGGGGGTGGGCAAGACGGCCATCGTCGAAGGCCTGGCCCAGGCGAT
TGCCGCCGGCACTGTGCCGGAACAGCTCCGCAACAAGCGGGTCATTTCGCTGGACCTTCCTGCCATGCTCGCAGGGACCC
GCTACCGGGGCGACTTCGAAGAGCGGCTGACCAAGGCGATGGACGAAGTCACCGCGAACCCGGGGCAGTTCATTCTGTTC
ATCGATGAGCTGCACACCGTCATCGGCGCAGGCGGCGCAGGGGAAGGTGGCATGGATGCGGGCAATATCCTGAAACCGCG
GCTGGCGCGCGGCGAACTCCATGTTGTGGGTGCCACCACTTTTAACGAATACCGCAAGGTGGAGAAGGACCCCGCGTTCG
AACGCCGGTTCCAGCCCGTGCAGGTGGGGGAGCCCGCCGTCGAGGATGCCGTGCAGATCCTTTCCGGGCTGCGCGAGCGG
TATGAAGAACACCACGGTGTCCGCTACACCGACGAAGCGGTCAGGGCCGCCGTCGAACTGTCCGCCCGGTACGTGACGGA
CCGGTTCCTTCCCGACAAGGCGATCGACCTCATGGACCAGGCCGGTGCCAGGCTGAGCCTGAAGCTCGGTTCCCGGCAGG
ACGCTGCCGCCCTGCGCGAGCGCTTGGTGGCGCTTGAGGAATCGAAGACCGCCGCCATAGCGGCGGAGGACTTCGAAGCG
GCCTCCCGGCTCCGGGACGAAGCGAACGCGCTGAAGGAAAAGCTCGACGGCGGCGCGGCCAGCCAGGAAGGCCCCGGCAG
CGAGTCCGCCGTCGTGGGTGAGGCGGAGATTGCCGAGATCATCTCCCGCGCAACGGGCATCCCGGCGAGCCGGATCACCG
AGGGTGACCGTGAACGCCTGGCCAGGCTCGAAGAGGACCTGCACCAGCGTGTTGTGGGCCAGGAGGATGCCGTGAGCCTG
ATTGCGAAGTCCGTTCGCCGCAACCGCACGGGCATGGGCGCCGCTGGCAGGCCGATCGGGAGCTTCCTCTTCCTGGGCCC
CACCGGCGTGGGCAAGACCGAACTCGCCAAGGCGCTCGCAGGCTCGCTCTTCGGCAGCGAGGACTCCATGATCCGCTTCG
ACATGAGCGAGTTCGGTGAACGGCATACGGTGAGCCGACTGGTGGGTGCCCCTCCGGGGTACGTGGGTTACGACGAGGCC
GGGCAGCTGACCGAGCGGGTGCGGCGCAATCCGTACTCGATCGTGCTGCTCGACGAGGTGGAGAAGGCCCACCCGGACGT
GTTCAACCTCCTGCTGCAGGTTCTCGACGACGGGCGCCTGACGGACGGGCACGGACGTACCGTGGACTTCCGCAACACGG
TGGTCATCATGACCTCGAACCTGGGGTCGGAGTTCCTGGCCAGCAAGGCGGGACCCACCGGGTTCACCGCGGCGGGGGAC
GCGTTCGGCTCGGAGAAGGCCCTGCGCGACCGCGTGCTGGCGCGGCTGCGTGAATCGATGCGGCCGGAGTTCCTTAACCG
CATCGACGAGATCGTCCTGTTCCGCAAGCTCGACCGGGCCCAGCTGCGCCAGATCGTGCGGCTGATGCTGGACGAGACCG
ACGCCCGCCTGCGCTCGCAGGGCATCGGGCTGGTGGTCAGCGAGGACGCGGTGGACTGGATTGCCGAGCGGGGCTACGAG
CCCGAATACGGTGCCCGGCCCATGCGGCGCGTGATCCAGCGCGAGCTTGATGACCGGATCGCCGACCTGCTGGTGGGCTC
CGGCCTGGCCGCCGGGGGACAGGTCACGGTGTCCGCGGACGGGCCTGAACTGGTGGTGGCTGCGGGCCGTCCGGAGGTTC
CGCTGGCCGCCTAG

Protein sequence :
MPTFFGPAGTGSGSFDEFLARYLQGQRAARSGRPTDITRLLSRRTHEVLSLAGQFAVDLGHGDVDALHILRTMAGAEPAT
SYMRRAGADPAAVARAAEERLPEKSGRAATSAPALTPSAQRALLDAYQVARAFGSTYIDPEHLFFALVLNQDAPAGQVLA
AAGVTPESFQAGARETSGTEPSGAGAPDAAASASGTGTAAATPMLDTYGTDLTALARSGGLDPVIGRSDETAQTIEVLAR
RTKNNPVLIGEAGVGKTAIVEGLAQAIAAGTVPEQLRNKRVISLDLPAMLAGTRYRGDFEERLTKAMDEVTANPGQFILF
IDELHTVIGAGGAGEGGMDAGNILKPRLARGELHVVGATTFNEYRKVEKDPAFERRFQPVQVGEPAVEDAVQILSGLRER
YEEHHGVRYTDEAVRAAVELSARYVTDRFLPDKAIDLMDQAGARLSLKLGSRQDAAALRERLVALEESKTAAIAAEDFEA
ASRLRDEANALKEKLDGGAASQEGPGSESAVVGEAEIAEIISRATGIPASRITEGDRERLARLEEDLHQRVVGQEDAVSL
IAKSVRRNRTGMGAAGRPIGSFLFLGPTGVGKTELAKALAGSLFGSEDSMIRFDMSEFGERHTVSRLVGAPPGYVGYDEA
GQLTERVRRNPYSIVLLDEVEKAHPDVFNLLLQVLDDGRLTDGHGRTVDFRNTVVIMTSNLGSEFLASKAGPTGFTAAGD
AFGSEKALRDRVLARLRESMRPEFLNRIDEIVLFRKLDRAQLRQIVRLMLDETDARLRSQGIGLVVSEDAVDWIAERGYE
PEYGARPMRRVIQRELDDRIADLLVGSGLAAGGQVTVSADGPELVVAAGRPEVPLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-153 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arth_3818 YP_833293.1 ATPase VFG0079 Protein 1e-167 51
Arth_3818 YP_833293.1 ATPase VFG0080 Protein 2e-151 51