Gene Information

Name : Arth_3279 (Arth_3279)
Accession : YP_832755.1
Strain : Arthrobacter sp. FB24
Genome accession: NC_008541
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3686522 - 3687325 bp
Length : 804 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa24350 putative ABC transporter ATP-binding protein

DNA sequence :
ATGAGCAGCCCGGCCATCCTGGTTGAAAACGTCACGGTCCACTACGGGGAGGTCCTGGCGCTGGATGCCGCGTCCCTGAC
GTTGGACTCCGCCCGGATCTGCGGCCTGATCGGCATGAACGGCTCCGGCAAGTCCACGCTGTTCAAGGTGATCATGGGAA
TGATCAAGCCCGACGCCGGCCGCGTCCTCATCAACGGAGCGTCACCTGCCAAGGCCCGCAAGGAAGGGGGAATCGGCTAC
GTCCCGCAAAGCGAAGACGTAGACTGGCAGTTCCCGCTGTCCGTCCGCGACGTGGTGATGATGGGCCGCTACGGGCACCA
GGGCTTCACCCGCCGCCCCTCCAAGGCCGACCGCGAGGCCGTCGACCTCGCGCTGGACCGGGTGGAACTGTCCGAGTTCG
CGAACCGGCAGATCGGCCAGCTGTCCGGCGGCCAGAAGAAGCGCGCGTTCGTGGCGCGCGGCATCGCCCAAGGTGCCACC
ATGATGCTCCTGGACGAGCCGTTCGCCGGGGTGGACAAGCGCTCAGAAGCCACCATCACGCGCCTGCTGCGTGAACTCGC
CTCGGACGGCTGCACCATCCTCATCTCCACCCACGATCTCCACGCCCTGCCCCAGCTCTGCGACGAAGCCGTGCTGCTGA
TGCGCAAGGTCCTCATGCACGGCCCGCCCGAGGTGGTCCTGCAGCCCGAGCACCTGGCCATGGCCTTCGGCCTGGACGTC
CTCAACCGGGACCTCCCAGCTACGGACCGTCCAATCCCGGACCTTCCAGCCACGGACCTTTTCCGGCAACAGGGCAGGAA
CTAA

Protein sequence :
MSSPAILVENVTVHYGEVLALDAASLTLDSARICGLIGMNGSGKSTLFKVIMGMIKPDAGRVLINGASPAKARKEGGIGY
VPQSEDVDWQFPLSVRDVVMMGRYGHQGFTRRPSKADREAVDLALDRVELSEFANRQIGQLSGGQKKRAFVARGIAQGAT
MMLLDEPFAGVDKRSEATITRLLRELASDGCTILISTHDLHALPQLCDEAVLLMRKVLMHGPPEVVLQPEHLAMAFGLDV
LNRDLPATDRPIPDLPATDLFRQQGRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-52 50
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-52 50
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 5e-52 50
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 5e-52 50
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-52 50
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-31 41
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arth_3279 YP_832755.1 ABC transporter-like protein BAC0350 Protein 1e-52 50
Arth_3279 YP_832755.1 ABC transporter-like protein BAC0440 Protein 2e-57 49
Arth_3279 YP_832755.1 ABC transporter-like protein BAC0400 Protein 5e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arth_3279 YP_832755.1 ABC transporter-like protein VFG0526 Protein 1e-52 50