|
Name : Arth_3278 (Arth_3278) Accession : YP_832754.1 Strain : Arthrobacter sp. FB24 Genome accession: NC_008541 Putative virulence/resistance : Virulence Product : ABC-3 protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 3685643 - 3686518 bp Length : 876 bp Strand : - Note : PFAM: transport system permease protein; ABC-3 protein; KEGG: nfa:nfa24360 putative ABC transporter membrane protein DNA sequence : ATGGACCTCTTCGACCTCGTGCTTGAACCCTTGAGCTACGACTTCATGGTGCGCGCCATCATCACCACGGCGCTCGCGGC CATCGTCTGTGCCGTGCTGAGCTGCTGGCTGGTGCTCATCGGCTGGTCACTCATGGGCGACGCCGTCTCCCACGCCGTGC TGCCCGGCGTCGTCCTGGCCTACATCGTCGGGGCGCCGTTCGCGATCGGGGCGCTGGTCTTCGCGCTGATCGCCGTCACC CTGATCGGGGTGGTTCGGAACACCAGCCGGGTCAAGGAGGACGCCGCGATCGGCATCGTGTTCAGCTCGCTGTTCGCCCT GGGCCTGGTGCTCATCTCCGTCACGCCGAGCCAGACCGACCTCAACCACATCATCTTTGGCAACCTGCTGGGCGTCAGCA TTCCGGACCTCATCCAGGTGCTGGTGCTGGGCGTGGTGGCGTTCGCCATCCTCATCCTCAAGCGCCGGGACCTGACGCTG TACGCCTTCGACCCCACGCACGCCCACGCCATCGGCCTGTCACCGAAGCGGCTGGGGGCGCTGCTGCTGGGCCTGCTGGC GCTGACCTCTGTGGTGGCCCTGCAGACCGTGGGTGTCGTGCTGGTGGTGGCCATGCTGATCATCCCCGGAGCCACGGCGT ACCTGCTGACGGACCGCTTCTCCCGCATGCTGGTGATCGCCCCCGTGATCTCGGCGGTGTGCTCGATCACCGGCATCTAC CTGAGCTACTACCTCGACACCGCCTCGGGCGCGATGGTGGTGCTCACCCAGGGTGTGGTGTTCGCCGCGGTCTACCTCTT CAGCCCGCGCCAGGGACTGATCGGCACCCGGCTGGCGAAGGCCCGACGCAGGAAAGCGGTAGCGCTCGCCGTCTGA Protein sequence : MDLFDLVLEPLSYDFMVRAIITTALAAIVCAVLSCWLVLIGWSLMGDAVSHAVLPGVVLAYIVGAPFAIGALVFALIAVT LIGVVRNTSRVKEDAAIGIVFSSLFALGLVLISVTPSQTDLNHIIFGNLLGVSIPDLIQVLVLGVVAFAILILKRRDLTL YAFDPTHAHAIGLSPKRLGALLLGLLALTSVVALQTVGVVLVVAMLIIPGATAYLLTDRFSRMLVIAPVISAVCSITGIY LSYYLDTASGAMVVLTQGVVFAAVYLFSPRQGLIGTRLAKARRRKAVALAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-46 | 47 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-46 | 47 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 6e-46 | 47 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 5e-46 | 47 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-46 | 47 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 1e-46 | 44 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-46 | 44 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 2e-46 | 44 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-46 | 44 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-46 | 44 |
| EF0576 | NP_814341.1 | cation ABC transporter permease | Not tested | Not named | Protein | 5e-34 | 43 |
| ef0094 | AAM75297.1 | EF0094 | Not tested | Not named | Protein | 4e-34 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Arth_3278 | YP_832754.1 | ABC-3 protein | BAC0441 | Protein | 2e-49 | 49 |
| Arth_3278 | YP_832754.1 | ABC-3 protein | BAC0442 | Protein | 2e-48 | 48 |
| Arth_3278 | YP_832754.1 | ABC-3 protein | BAC0352 | Protein | 3e-46 | 47 |
| Arth_3278 | YP_832754.1 | ABC-3 protein | BAC0351 | Protein | 9e-47 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Arth_3278 | YP_832754.1 | ABC-3 protein | VFG0528 | Protein | 3e-46 | 47 |
| Arth_3278 | YP_832754.1 | ABC-3 protein | VFG0527 | Protein | 8e-47 | 44 |
