Gene Information

Name : Arth_0168 (Arth_0168)
Accession : YP_829669.1
Strain : Arthrobacter sp. FB24
Genome accession: NC_008541
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 171594 - 174086 bp
Length : 2493 bp
Strand : +
Note : PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: sco:SCO3373 putative Clp-family ATP-binding protea

DNA sequence :
ATGTTTGAGCGATTTACGGACCGTGCCCGTCGCGTAGTTGTGCTTGCCCAAGAAGAGGCACGCATGCTGAACCACAATTA
CATCGGTACCGAACACATCCTCTTGGGTCTGATCCACGAGGGTGAGGGCGTTGCCGCCAAAGCTCTGGAGTCCTTGAGCA
TTTCGCTCGACGGCGTGCGCGAGCAGGTGCAGGAGATCATTGGCCAGGGCCAGCAGGCCCCGTCCGGCCATATCCCTTTC
ACCCCGCGCGCCAAGAAGGTGCTGGAGCTCTCGCTCCGCGAAGCCCTGCAGCTGGGCCATAACTACATCGGCACGGAGCA
CATCCTGCTGGGGCTCATCCGCGAGGGTGAAGGCGTGGCCGCCCAGGTGCTCGTGAAGCTCGGAGCGGACCTCAACCGCG
TCCGCCAGCAGGTGATCCAGCTGCTCTCGGGTTACCAGGGCAAGGAGACCACCGGCGCAGGCGTCGGTGCCGGTCAGCCG
GAGGGAACTCCCGCCGGCTCCGTGGTCCTGGACCAGTTCGGCCGCAACCTGACCCAGGCTGCGCGCGAGAACAAGCTGGA
CCCGGTCATCGGACGCGAACAGGAAATGGAACGCGTTATGCAGGTCCTTTCCCGGCGCACCAAGAACAACCCTGTCCTCA
TCGGCGAGCCCGGCGTCGGCAAGACAGCCGTCGTCGAAGGACTCGCCCAGGCGATTGTCCGCGGGGACGTCCCGGAGACC
ATCAAGGACAAGCAGCTCTACACGCTGGACCTTGGGTCTTTGGTCGCAGGCTCCCGGTACCGCGGTGACTTCGAAGAGCG
ACTGAAGAAGGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAAATCCACACCCTGGTGGGTG
CGGGTGCCGCCGAAGGCGCCATCGATGCCGCATCCATCCTGAAGCCCATGCTGGCGCGCGGCGAGCTTCAGACCATCGGT
GCCACCACGCTGGACGAATACCGCAAGCACATCGAAAAGGACGCAGCGCTCGAGCGCCGCTTCCAGCCGATCCAGGTCAA
GGAACCCTCCGTGGCTCACGCGATCGAGATCCTCAAGGGCCTGCGTGACCGCTACGAGGCCCACCACCGGGTGACCATCA
CCGACGGTGCCCTCGCCTCCGCAGCCAACCTGTCCGAACGCTACATCTCGGACCGGTTCCTGCCGGATAAGGCGATTGAC
CTCATCGATGAAGCCGGTGCACGCCTGCGTATCCGCCGGATGACCGCTCCGCCGGAGCTGAAGGCCATGGATGAGCGCAT
CGCCGAACTCAAGATGGAGAAGGAGTCCGCGATTGATGCGCAGGACTTCGAAGGCGCCGCCTCCCTGCGCGACAAGGAGC
AGAAGCTCATTGCCGAGCGGGCCGAGAAGGAACGCCACTGGAAGACCGGCGGCATGGACGACATCTCCGAGGTGGATGAG
GATCTCATCGCCGAGGTGCTGGCCAACTCCACCGGCATTCCGGTCTTCAAGCTGACCGAGGAAGAGTCCTCGCGCCTGCT
GAAGATGGAAGACGAACTGCACAAGCGCGTCGTCGGCCAGAACGAGGCCATCAAGGCCCTGTCCCAGGCCATCCGGCGCA
CCCGTGCAGGCCTCAAGGACCCCAAGCGTCCGGGCGGCTCGTTCATCTTCGCCGGCCCCACCGGCGTCGGCAAGACCGAG
CTCGCCAAGGCCCTCGCGGAGTTCCTGTTCGGTGAAGAGGATGCCCTCATCACCCTGGACATGTCCGAATACTCCGAGAA
GCACACGGTGTCGCGCCTCTTCGGTGCGCCTCCGGGCTACGTTGGCTACGAGGAAGGCGGTCAGCTGACCGAAAAGGTCC
GCCGCCGTCCGTTCTCCGTGGTGCTGTTCGACGAAGTGGAAAAGGCCCACGCGGACCTCTTCAACTCATTGCTGCAGATT
CTGGAAGACGGCCGCCTGACCGACTCCCAGGGCCGCGTGGTGGACTTCAAGAACACCGTGATCATCATGACCACCAACCT
CGGCACCCGGGACATCTCCAAGAGCGTTGCCACCGGCTTCCAGTCCGGCACGGACACGCAGACCGGCTACAACCGGATGC
GCGCCCGGGTCACTGAAGAGCTCAAGCAGCACTTCCGCCCCGAGTTCCTGAACCGTGTTGACGACGTTGTGGTGTTCCCG
CAGCTTACCCAGGACGAGATCATCGAGATCGTGGACCTGTTCGTGAGCCGCTTGGAGAAGCGCCTCAAGGACAAAGACAT
GGGTATCGAGCTCACGAAGGCCGCCAAGGTCCTCCTGGCCACCCGCGGCTACGATCCCGCCATGGGTGCACGGCCGCTGC
GCCGCACGATCCAGCGCGAGATCGAGGACCAGCTGTCCGAGAAGATCCTCTTCGGAGAGATCCACGCGGGCGACATCGTA
GTGGTGGATGTGGACGGCGAAGGTGACGACGCCAAGTTCACTTTCGAAGGAAACGCCAAGCCGCGCATCCCCGAAATCGC
CCCGAGCGTCTAG

Protein sequence :
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVREQVQEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKETTGAGVGAGQP
EGTPAGSVVLDQFGRNLTQAARENKLDPVIGREQEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPET
IKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG
ATTLDEYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGALASAANLSERYISDRFLPDKAID
LIDEAGARLRIRRMTAPPELKAMDERIAELKMEKESAIDAQDFEGAASLRDKEQKLIAERAEKERHWKTGGMDDISEVDE
DLIAEVLANSTGIPVFKLTEEESSRLLKMEDELHKRVVGQNEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPTGVGKTE
LAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHADLFNSLLQI
LEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKSVATGFQSGTDTQTGYNRMRARVTEELKQHFRPEFLNRVDDVVVFP
QLTQDEIIEIVDLFVSRLEKRLKDKDMGIELTKAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEKILFGEIHAGDIV
VVDVDGEGDDAKFTFEGNAKPRIPEIAPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arth_0168 YP_829669.1 ATPase VFG0079 Protein 0.0 63
Arth_0168 YP_829669.1 ATPase VFG0080 Protein 3e-154 51