Gene Information

Name : Arth_1587 (Arth_1587)
Accession : YP_831081.1
Strain : Arthrobacter sp. FB24
Genome accession: NC_008541
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1768740 - 1769498 bp
Length : 759 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: bbr:BB4630 short chain dehydrogenase

DNA sequence :
ATGACTGCCTCAGCGGGGGGCGTTGCCCTGGTCACCGGGGCCAGCCGTGGAATCGGCGCCGCCATCGCCCTCCGCGCGGC
ACGGGCCGGTTACGCCGTCCTGGTCAACTATTCCGCGGACTCCGCCGGAGCTGCATCCATAGTGCAGGAAATTCGGGATG
ACGGCGGCACGGCGCTGGCGCACCAGGCAGACGTCAGCGATCCGGAAGCGGTTGGATCAATGTTCGACCAGGCGGCTACT
TTGGGCGCCGTCACGGCTGTGATCAACAATGCGGGGATTACGGGCAACCTGATCGGCAACCTCTCGGACGTTCCTCCGGC
AACTGTCCGACGAGTCATGGACGTCAACGTGTCAGGGCTGATCTATGTCTGCCAGGAAGCGGTGCGGCGGCTCAGCACAG
CCACTGGCGGACCCGGCGGATCCATCGTCAACATTTCTTCCACCGCGACGAAGGCCGGGTCGCCGGGCACCTGGGCGCAT
TACGCAGCGTCGAAGGGTGCTGTTGATGTACTCACGGTGGGGCTTGCCTCGGAAGTCGCTGCGCAGGGAATCCGGGTCAA
CTGCGTCGCCCCCGGGAGCACCAACACCGGCCTGCACGCAGCAGCGGGAATGCCCGACCGGGTGGAGCGCCTGAATCCGA
CCATCCCCATGGGCCGGGGCGCCGAACCTGACGAGGTTGCGGCTGCGGTGCTGTGGCTGCTGTCCCGTGACGCCGGCTAC
ATTACCGGAGCCGTAGTCCCAGTGGCCGGAGGCCGCTGA

Protein sequence :
MTASAGGVALVTGASRGIGAAIALRAARAGYAVLVNYSADSAGAASIVQEIRDDGGTALAHQADVSDPEAVGSMFDQAAT
LGAVTAVINNAGITGNLIGNLSDVPPATVRRVMDVNVSGLIYVCQEAVRRLSTATGGPGGSIVNISSTATKAGSPGTWAH
YAASKGAVDVLTVGLASEVAAQGIRVNCVAPGSTNTGLHAAAGMPDRVERLNPTIPMGRGAEPDEVAAAVLWLLSRDAGY
ITGAVVPVAGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 3e-41 45
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 5e-41 44