Gene Information

Name : Arth_0988 (Arth_0988)
Accession : YP_830485.1
Strain : Arthrobacter sp. FB24
Genome accession: NC_008541
Putative virulence/resistance : Unknown
Product : N-6 DNA methylase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 1068219 - 1069802 bp
Length : 1584 bp
Strand : -
Note : PFAM: N-6 DNA methylase; KEGG: mhu:Mhun_2789 N-6 DNA methylase

DNA sequence :
ATGGCGCGTCTTGCAAAGATAAAAGTCAAGACGCTCGAACAGCGACTGTGGGATACCGCAGACGCCCTCCGGGGAAACCA
GGAACCCTCCGAGTACAAGCACGTTGTCCTCGGTCTCGTCTTCCTCAAATACATCTCCGACCGCTTCGAGGAACGCCGAC
GCGCGATCGAAACCAGCCTGAGCGATCCGAACTCAGAGGAATACATCCCCAACGAAGCACGCCGCTCGGAATTCCTTGAG
GACCGCGACGAGTACGCCAGCCACAACGTCTTCTGGGTGCCCGAACTGGCACGCTGGGGATATTTGCAGGACAACGCCAA
GCTACCCAAAATCGGGCAGCAACTTGACCAGGCGATGGACCTGATCGAGAAGGAGAACCCGATCATCCGGGGCGTGCTTC
CGCGCAACTACGGGCGCGAGGGCCTCGACAAGAGTCGTCTCGGTCAGCTCGTCGACTTGATCGGCTCGATCGGATTCACC
GAGAGCGACGACCATGGCTCTGATGATGTGTTGGGCCGTGTCTACGAATACTTCCTCGGCCAGTTTGCAGGTAAGGAGAC
CGGCAAGGACGCTGGGGCTTTCTACACGCCCCGCAGTGTGGTAAAAACCCTCGTCGAGATGCTCGAACCGTTCCACGGCC
GCGTCTACGACCCCGCCTGTGGATCAGGCGGCATGTTCGTCCAGTCAGCGGAGTTCGTGACGGCCCACGGCGGTGAACGG
ACCGACATCTCGGTCTACGGCCAGGAGTTCACCGACACCACTTGGAAGCTAGCCAAGATGAACCTCGCGCTGCGAGGCAT
CGAGGCTGACCTCGGGGACCGATCAGCCGATTCCTTCACCCAGGACCTCCACCGCGATCTCCGGGCTGACTTCATCATCG
CAAACCCGCCGTTCAACGTTTCTAACTGGTGGAACGCGAAACTCGCCGACGACCCCCGTTGGAAGTACGGTACCCCACCC
GAAGGCAACGCGAACTTCGCCTGGGTCCAGCACTTTCTACACCATCTAAGTCCAAAGGGCACGGCCGGGTTCGTTCTATC
GAACGGATCACTGTCCTCTAAGAGCAGCGGCGAGGGCGAGATCCGTCGCAAGCTGGTCGAGGCCGATCTCGTCGACTGCA
TCGTCGCGATGCCAGACAAGCTCTTCTTCAACACCGGCATCCCGGTCAGCCTGTGGTTCATCTCGAAGGAACGCCACGGC
AACGGGCACCGCGCACGGCAGGGCGAAGTGCTGTTCATTGACGCCAGCAAGCTCGGTCGCATGGAGAACCGGCGCCTGCG
GGTGCTCGACGATGACCGGGACATCGCCAAGATCGCCGGGGCGTACCACGCCTGGCGCAACCACGACGGCGGCTACGAAG
ACGTGCCCGGATTCGTGGTGGCCGCGACTCTCGAGGAGATCAGACAACATGACTTCGTGCTGACGCCTGGGCGGTATGTC
GGTACGAAGGAAGCTGAGGCTGATTGGGAGCCGGTTGAAGACAAAATCGCCCGATTGACCGGGGAGCTGTATGCGGAGTT
CGAGCGCGGGCGGAAGCTTGAAGAAGTGGTGCGTGAACGACTCGGCGGCCTCAATGCCGACTAG

Protein sequence :
MARLAKIKVKTLEQRLWDTADALRGNQEPSEYKHVVLGLVFLKYISDRFEERRRAIETSLSDPNSEEYIPNEARRSEFLE
DRDEYASHNVFWVPELARWGYLQDNAKLPKIGQQLDQAMDLIEKENPIIRGVLPRNYGREGLDKSRLGQLVDLIGSIGFT
ESDDHGSDDVLGRVYEYFLGQFAGKETGKDAGAFYTPRSVVKTLVEMLEPFHGRVYDPACGSGGMFVQSAEFVTAHGGER
TDISVYGQEFTDTTWKLAKMNLALRGIEADLGDRSADSFTQDLHRDLRADFIIANPPFNVSNWWNAKLADDPRWKYGTPP
EGNANFAWVQHFLHHLSPKGTAGFVLSNGSLSSKSSGEGEIRRKLVEADLVDCIVAMPDKLFFNTGIPVSLWFISKERHG
NGHRARQGEVLFIDASKLGRMENRRLRVLDDDRDIAKIAGAYHAWRNHDGGYEDVPGFVVAATLEEIRQHDFVLTPGRYV
GTKEAEADWEPVEDKIARLTGELYAEFERGRKLEEVVRERLGGLNAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM BAH57701.1 type I restriction-modification system DNA methylase Not tested Type-VII SCCmec Protein 3e-132 53
hsdM BAD24842.1 HsdM protein Not tested Type-V SCCmec Protein 3e-131 52
hsdM YP_251979.1 type I restriction-modification system DNA methylase Not tested SCCmec Protein 5e-132 52
api49 CAF28523.1 putative HsdM-like N-methyl transferase Not tested YAPI Protein 1e-113 47