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Name : Arth_0986 (Arth_0986) Accession : YP_830483.1 Strain : Arthrobacter sp. FB24 Genome accession: NC_008541 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 1063872 - 1066994 bp Length : 3123 bp Strand : - Note : KEGG: dge:Dgeo_2012 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD/DEAH box helicase domain DNA sequence : ATGAGCGACCTGAACGAGTCAACGGTAGAGCTGGCGGTGCTTCAGTATCTGCGCGAACTCGGCTACACGACGGCCTTCGG CCCAGACATCGCGCCCGAAGCGGCTGCGGCTGAGCGTTCGTCTTACGAGCAGGTATACCTGTTGAGCCGCTTGCGCGCGG CGGCGGTTCAGATCAACCGTGGCCTTGATGCGGCTCTCATTGATGAGGCGATCAAGCGCCTCGGCCGGGCGGAATCACAG AACCCAGTTGCGGAGAACCTTCGCGTCCACGAACTCCTGACCGAGGGCGTTCCGGTCGAACACCGCGACGCCGAAGGCTC TGTACGGACGACTCGTGTCCGCCTCATCGACTTCGAGGACCCGGCAGGCAACGACTGGCTCGCCGTCAACCAGTTCACAA TCATCGAGAACGGCAAGAACCGACGTCCGGACGTCGTGCTCTTCTTGAACGGCATGCCGCTTGGCCTGCTGGAGCTGAAG AACCTGGCCGACGAGCACGCGACGCTCAAGGGAGCCTGGAACCAAATCCAGACCTACCGCCATGACATTCCATCCCTGTT CACTCCGAACGCGGTGACGGTCGTCAGCGATGGCGTCAGCGCCGCCATGTCGTCATTCACGGGCGGCTTCGAGCACTATG CGCCGTGGAAAACGATCGACGGACGCGAGGTCGTGATGAATCTGCCCGCAGTCGAGGTGTTGATCAAGGGCGTCTTCGAC CAGAAGCGCTTCCTCGACATTCTGCAGAACTTCATCGTCTTCAGCGACGAGTCCAAGGGGCTCGTGAAGCGCGTCGCGAA ATACCACCAGTACTGGGCCGTCAATGCCGCGGTCGAGTCGACCATCGAGGCAGCAGGTCCCGATGGCGACCGCCGCGGCG GCGTCGTGTGGCACACCCAAGGGAGTGGCAAGTCGATCGAGATGTTGCTCTACGCGGCGAAGATCATGCGCGACATTCGG ATGGGCAACCCGACGTTGTTGTTCATCACCGACCGCAACGACCTCGACGACCAGCTCTTCGGCGAGGTGTTTGCACCAGC CGAGATCCTGCCTGAGAAGCCCGTCCAAGCTGACTCCAGAGCAGACCTTCGCAGCCTGCTCCGCCGCGCGTCCGGCGGCA TCATCTTCACCACCGTGCAGAAGTTCGCCCCCGAGGCTGGTGGCGACACCAACCCGGTACTGACCGACCGCCGCAACGTC GTCGTTGTCGCCGACGAGGCTCACCGATCCCAATACGGCTTCACCGAGTCCCTTGACGAGCGCACCGGGCAGTTGAAGTC TGGGCTCGCGAAGCACATGCGCGACGCCCTCCCGAACGCCACCTATCTCGGGTTCACGGGCACACCCATCGAGTCGAACG ACAAGTCAACTCGCTCCGTGTTCGGTGACTACATCGACATCTATGACCTCACGCGCGCTGTTGAGGACGGTGCCACCGTC CGGATTTTCTACGAGTCCCGACTCGCGAAGGTGTCCCTCGATGCTGATGTGCACGCTGCAATCGACGAACTCGCCGACGA AATAACCGAGACCGCAGAAGAGGACGAGGCCACCCGCGCCAAGTCCAGGTGGGCACGGTTGGAAGCCGTCGTGGGCGCGA ATGACCGTCTCGATGTGATTGCAGGCGACATCGTCGACCACTGGGAGAAACGCCGGACCGAGATGTTCGGCAAGGCCATG ATTGTCACGATGTCGCGGCGCATCGCCGTCGACCTCTACGACAAGATCGTTAAGCTCAAGCCGGAGTGGCACACCGACGA CCCGACGACAGGCATGATCAAGGTCGTCATGACCGGTTCGGCGGCCGACCCTCAGGCCTTCCAGCCGCACATCTACGACA AGAAGACCCGCAAAGACCTTAAACTGCGGGCAAAGGACCCAAACGATTCCCTCGAGATCGTCATCGTCCGCGACATGTGG CTTACCGGCTTCGACGCCCCGTCGATGCACACTATGTACGTCGACAAACCAATGCAGGGCGCCGGCCTGATGCAAGCCAT CGCACGGGTGAACCGTACCTTCCGCGACAAGCCCGGCGGCCTGATCGTCGACTACATCGGCGTCGCCACAAATCTGCGCA GGGCCCTAGCCGAGTACTCCCCCAGCGATCGTGACCAGGCCGGCGTGCCGATTGAGGAGATCGTCTCCGCCATGTTGGAA AAGCACGACATCGTGCGAGGACTCCTTCACGGTTGCAGGTACAATTCCTCGCCGCTACTGGCGCCCGCCGCACGCCTAGC CCAGCACGCGCTCGTTCTCGACTTCGTTATGGCCGACCCGGACCGCACCGCACGTTACCTCGACCAAGTGCTCGCGCTAG CCAAGGCCTTTGCGCTCTGCGGGGCGCGGGATGAAGCAGCTGCGATCCGTAATGACGTGCGGATGTTCGCCGATGTCCGA GCGGCGACCCTGAAGATCCAGAATCCGGACTCAGGGCGTGCCGGCAGCGGTGCCGTAGAAATAGACACCGCGATCGGGCA ACTCGTCAACGAAGCCGTCACCGCCGACGAGGTCGTTGATATCTACAAGCTCGCCGGCATTGAAACTCCAGAGCTGTCGA TCCTGTCGGACGAGTTCCTCGACACCCTGGCCGGGAAGGAGAAGCCCAACCTCCAGATGGGGCTCCTCCGCCGGCTGATC AACGATCAAATCCGCACCGTCCAGCGCACCAATATCGTTCAGGCACGAAAATTCTCCGAGCAGCTCGACGAGGCAATTAA CCGCTATACGAACCGCACACTGACGACAGCAGAAATCATTGCCGAGCTCGTCAAGCTCGCCAAAGACATGCGAAACCAGA ACGACCGTCACAACAGACTCGGTCTTTCTGTCGCCGAGGCTGCATTTTACGATGCCATCGTGCAAAACGACGTCGCTGTC CTCCAGATGGGCGACGACACGCTAAAGAAGATTGCCGTCAATCTCGTTTCCACCGTCCAGCGGAGCGCCACAATCGACTG GTCCCTCAAACATTCGGTCCGGGCCGCCATGAGATCCAAAATCCGTCGGCTACTTGCAAGGTACGACTACCCGCCCGATC ACGAGGAGAAGGCGATTGAGCTGATACTCCGACAAGCTGAGCTAATCGCCGGGACCGAAGCGCAGTCAACGGTACGCACT TGA Protein sequence : MSDLNESTVELAVLQYLRELGYTTAFGPDIAPEAAAAERSSYEQVYLLSRLRAAAVQINRGLDAALIDEAIKRLGRAESQ NPVAENLRVHELLTEGVPVEHRDAEGSVRTTRVRLIDFEDPAGNDWLAVNQFTIIENGKNRRPDVVLFLNGMPLGLLELK NLADEHATLKGAWNQIQTYRHDIPSLFTPNAVTVVSDGVSAAMSSFTGGFEHYAPWKTIDGREVVMNLPAVEVLIKGVFD QKRFLDILQNFIVFSDESKGLVKRVAKYHQYWAVNAAVESTIEAAGPDGDRRGGVVWHTQGSGKSIEMLLYAAKIMRDIR MGNPTLLFITDRNDLDDQLFGEVFAPAEILPEKPVQADSRADLRSLLRRASGGIIFTTVQKFAPEAGGDTNPVLTDRRNV VVVADEAHRSQYGFTESLDERTGQLKSGLAKHMRDALPNATYLGFTGTPIESNDKSTRSVFGDYIDIYDLTRAVEDGATV RIFYESRLAKVSLDADVHAAIDELADEITETAEEDEATRAKSRWARLEAVVGANDRLDVIAGDIVDHWEKRRTEMFGKAM IVTMSRRIAVDLYDKIVKLKPEWHTDDPTTGMIKVVMTGSAADPQAFQPHIYDKKTRKDLKLRAKDPNDSLEIVIVRDMW LTGFDAPSMHTMYVDKPMQGAGLMQAIARVNRTFRDKPGGLIVDYIGVATNLRRALAEYSPSDRDQAGVPIEEIVSAMLE KHDIVRGLLHGCRYNSSPLLAPAARLAQHALVLDFVMADPDRTARYLDQVLALAKAFALCGARDEAAAIRNDVRMFADVR AATLKIQNPDSGRAGSGAVEIDTAIGQLVNEAVTADEVVDIYKLAGIETPELSILSDEFLDTLAGKEKPNLQMGLLRRLI NDQIRTVQRTNIVQARKFSEQLDEAINRYTNRTLTTAEIIAELVKLAKDMRNQNDRHNRLGLSVAEAAFYDAIVQNDVAV LQMGDDTLKKIAVNLVSTVQRSATIDWSLKHSVRAAMRSKIRRLLARYDYPPDHEEKAIELILRQAELIAGTEAQSTVRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 45 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 45 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 45 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 44 |
