Gene Information

Name : Acid_0942 (Acid_0942)
Accession : YP_822226.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1181214 - 1182053 bp
Length : 840 bp
Strand : -
Note : PFAM: Integrase, catalytic region; KEGG: gvi:glr0077 transposase

DNA sequence :
ATGAGTGTCGTGCAGATGTGCGAGTCGCTGGGCATCAGCCGGGCAGGATACTACCGCTTTTTGGATCCGGAAAAGCCGGC
ACCCGCCGATATGGATCTTCGCGACGAGATGCACCGGGTAGCCCTCGATTGGCCCTGCTATGGGAGCCGGCGTATCGTCG
AGGAACTCAAGGCTCGTGGATGGGAGGTCAACCGCAAGCGGATTCAGCGGCTGATGCGGGAAGACAACCTGCTGTGTGTG
ATCAAACGCAAGTTCGTCGTAGCCACCACCGATTCCCGTCACGGTCTGAAGGTATATCCGAATCGCGCCGCGGAGATGAC
GCTAACCGGAGTCGATCAGCTCTGGGTGGCCGATATCACCTACATCCGACTGGAAGAGGAGTTTGTCTACCTGGCGGTCA
TTCTGGATGCCTTCTCACGCCGGGTCATTGGCTGGCATTTGGGGGAAACCTTAGAAGTTTCCCTCACGCTGAATGCCTTG
CGCATGGCGCTTGGGCAACGATCGGTAAGTCCGGGCCCGGTTCACCACTCCGACCGCGGAGTCCAGTATGCCAGTCACGA
TTACACGCAACTGCTCCAGGACAACGGGATCGAAATCAGCATGAGTCGCAAAGCCAACCCCTGGGACAATGCGGCCTGCG
AGTCCTTCATGAAAACGCTGAAGTACGAGGAGGTACACCGCACCGAATATCGCAATCTGGCACACGCCCGTGCGTCGATA
AAGACCTTCCTGGAGAAGATCTATAACCAAAAGCGATTGCACTCGTCCTTGAGCTATCGCTCGCCGGTCGAGTTCGAACA
CTCTCTAGCGGCCACCGCTTCTCAGCAGGTGGCGGTATGA

Protein sequence :
MSVVQMCESLGISRAGYYRFLDPEKPAPADMDLRDEMHRVALDWPCYGSRRIVEELKARGWEVNRKRIQRLMREDNLLCV
IKRKFVVATTDSRHGLKVYPNRAAEMTLTGVDQLWVADITYIRLEEEFVYLAVILDAFSRRVIGWHLGETLEVSLTLNAL
RMALGQRSVSPGPVHHSDRGVQYASHDYTQLLQDNGIEISMSRKANPWDNAACESFMKTLKYEEVHRTEYRNLAHARASI
KTFLEKIYNQKRLHSSLSYRSPVEFEHSLAATASQQVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-37 45
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-37 45
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 6e-37 45