Gene Information

Name : Acid_6985 (Acid_6985)
Accession : YP_828183.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Unknown
Product : ribokinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0524
EC number : -
Position : 8773491 - 8774435 bp
Length : 945 bp
Strand : +
Note : TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: dps:DP1974 related to ribokinase

DNA sequence :
ATGAGACGACAGCCGCGGATTGTGGTGATCGGCAGCGCAAACATCGACCTGGTCACTTACACCGACCAGTTCCCGCGTCC
CGGAGAAACCATATTCGGCCGCGAATTCAGCCTCGGCTTCGGCGGCAAAGGCGCCAACCAGGCCGTCGCGGCCCGACTCT
GCGGCGCCGAGGTGGCGATGGTGGCTCGCGTCGGCGACGATCTCTTCGGCCCCGCCAACATCCAGAACTTCACCTCGCGC
GGCATCGACGTCCGCCACGTCATGACCACCGCCGGCGTCTCCAGCGGCGTCGCGCCCATCTTCGTCGAAAGCTCCGGCCA
GAACCGCATCTGGGTCGTCAAAGGCGCCAACGACCGGCTCCTCCCCGCCGACGTCGCCGCCGCTTCAGACGTCCTCGCCG
GCGCCGACTTCCTGGTCATGCAGCTCGAAATCCCCACCGAGACCGTCTACTACGCTCTCCGCTTCGCCCGCGAGCGCGGC
ATCCGCACCATCCTGAATCCCGCCCCCGGCCAGGCGCTCGACCTCGCCCAAATCGCCTCCGCCGATTACGTCATTCCCAA
CGAGACCGAAGCCGAAGCTCTCGCCGGCACCCCCGTGCATGCCCTCGAAGACGCGCAGCGCTGTGCCCAGAAGCTGCTCG
ATGGTGGATTGCGCCGCGTGATCGTGACCCTCGGCGCCAACGGCGCGCTGCTCGCCACCCACGATGGCATGCACCACGTC
GCGCCCTTCCCTGTCCAGCCCATCGATACCACCGGCGCCGGCGACGCCTTCATCGGCAGCTTCGCCTGCTTCTGCGCCGA
GGGCTTCGACGAACTCGCCGCCATCGCCCGCGCCAATCTTTACGCGGCCCTCTCCACCCTCGGCCCCGGCACCCAAAAAT
CCTTCGTCTCCCGCGAACGCTTCAACACCGAGTGGGCCGCCCGCTCAGTCTCCGTAACTCCCTGA

Protein sequence :
MRRQPRIVVIGSANIDLVTYTDQFPRPGETIFGREFSLGFGGKGANQAVAARLCGAEVAMVARVGDDLFGPANIQNFTSR
GIDVRHVMTTAGVSSGVAPIFVESSGQNRIWVVKGANDRLLPADVAAASDVLAGADFLVMQLEIPTETVYYALRFARERG
IRTILNPAPGQALDLAQIASADYVIPNETEAEALAGTPVHALEDAQRCAQKLLDGGLRRVIVTLGANGALLATHDGMHHV
APFPVQPIDTTGAGDAFIGSFACFCAEGFDELAAIARANLYAALSTLGPGTQKSFVSRERFNTEWAARSVSVTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoK ADD91722.1 deoxyribokinase DeoK Not tested PAI-I AL862 Protein 1e-48 46
unnamed CAE85173.1 hypothetical protein Not tested PAI V 536 Protein 2e-48 46
ORF4 AAK27331.1 unknown Not tested PAI-I AL862 Protein 5e-44 45