Gene Information

Name : Acid_6895 (Acid_6895)
Accession : YP_828093.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 8668573 - 8669301 bp
Length : 729 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gme:Gmet_3383 two component transcriptional regulator, winged helix family

DNA sequence : 
GTGCTCAGGCATTCCTCAGAAACGGCGGCCATACTGGTATCGATAGAGATGCGAATCCTTATTGTCGAGGATGATCGAAA
GCTCGCGCGTCAACTCAAGAAGGGAGTGGATGAATCTGGTCACGCCAGTATTCTTGCATTCGATGGGCGCGAAGGACTGG
AGGCTGCGCAAGGCAACGAGTTCGATGTCATCGTGCTCGACGTGATGCTGCCGAAGTTGGATGGGATCTCTGTACTCAGG
CAATTGCGGCAGACGCGAATCGGCACGCCCATCCTGCTGCTCACCGCGCTCGACACGCCGGACGACATCAGTACGGGACT
TGATGCCGGTGCCGACGACTACCTGACGAAACCATTCTCCTTTAAGGTCCTGCTGGCACGCCTCCGGGCCCTGTCGCGAC
GGCGTCAGGCCGATCGTCAGACGCTGTTGCGCATTGCCGATTTGGCACTCGATCCCGCAACCCATGATGTGAAGCGTGCC
GGCGCGATGGTCAGCCTTTCGAAAACAGAGTTCGTAATCCTCGAAATCCTGATGCGGAGTTCGGGCCGCGTGATCACTCG
AACCCGTTTGATCGACGCCGTCTGGGGTCATGAGAGGGATGTCCAGAGCAACACGCTGGACGTCTTCATCCGTCAACTTC
GGACGAAGATCGAACCGGCCGGAACAACCAAGTTGCTCCATACCGTCCGCGGCATCGGATACACGCTGCGAGAGGAGGAG
CCCGGGTGA

Protein sequence : 
MLRHSSETAAILVSIEMRILIVEDDRKLARQLKKGVDESGHASILAFDGREGLEAAQGNEFDVIVLDVMLPKLDGISVLR
QLRQTRIGTPILLLTALDTPDDISTGLDAGADDYLTKPFSFKVLLARLRALSRRRQADRQTLLRIADLALDPATHDVKRA
GAMVSLSKTEFVILEILMRSSGRVITRTRLIDAVWGHERDVQSNTLDVFIRQLRTKIEPAGTTKLLHTVRGIGYTLREEE
PG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-34 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_6895 YP_828093.1 two component transcriptional regulator BAC0197 Protein 9e-37 47
Acid_6895 YP_828093.1 two component transcriptional regulator BAC0125 Protein 2e-38 45
Acid_6895 YP_828093.1 two component transcriptional regulator BAC0308 Protein 7e-36 45
Acid_6895 YP_828093.1 two component transcriptional regulator BAC0347 Protein 2e-33 42
Acid_6895 YP_828093.1 two component transcriptional regulator HE999704.1.gene1528. Protein 2e-35 41
Acid_6895 YP_828093.1 two component transcriptional regulator AE000516.2.gene3505. Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_6895 YP_828093.1 two component transcriptional regulator VFG1390 Protein 5e-42 43
Acid_6895 YP_828093.1 two component transcriptional regulator VFG0596 Protein 3e-35 41