Gene Information

Name : Acid_6862 (Acid_6862)
Accession : YP_828062.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 8614009 - 8614839 bp
Length : 831 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: gvi:glr0077 transposase

DNA sequence :
ATGACGATTCTGCGCATGTGTGAACTGGGCGACATCAGCCGGGCTGGCTTCTACCGGTTCGATCCGGAGGCGGAGCAGCG
CGAGGAAGAGTTGGACCTGCGCGACGCGATCCAGAGGATCGCTCTGGAATTCCCATGCTACGGTAGGCCCAGAATCACCG
CCGAGCTTCGGCGTCAGGGCTGGGCAGTGAATCATAAGAGGGTTGGACGCATCATGCGGGAAGACAACCTCCTTTGCATT
CGCCGGAGGAAGTTTGTTTGCTGCACCACCGATTCCAATCACGGCCTTCGCGTCTATCCCAACTTGGCCAAGAAGATGGA
GTTGACCGGGTTGGACCAGTTGTGGGTGGCCGACATCACCTACATTCGGCTGGAGACGGAGTTCATCTATCTGGCGGTGG
TGCTGGATGCATTCTCAAGACGGGTAATTGGCTGGGCTCTGGGCCGGACTCTGGAAGCTAGCCTGGCGGTGCAGGCGTTG
AAGATGGCTTTCCGGCGGCGGGGCTCCGTCAAAGGATTGACCCATCATTCCGACCGCGGCGTGCAATACGCTTCCAAGGA
ATACACGGATTTGCTGAAGGAACACGGCGTTCAGATCAGCATGAGCCGGAAGGGCAATCCCTACGACAATGCCAAATGCG
AATCCTTCATGAAGACCTTGAAATACGAGGAGGTCTATAGACAAGAATATCGCGACCTCGCCGAGGCGCAAGCGTCGGTG
GAAAAGTTCATTGAGAAAATCTACAACGGCAAGCGTCTGCACTCGGCGCTGGGCTACTGCTCGCCGGTCGAGTTTGAACG
TTCGCTGGTGCCGCTGGAGCAAACCGCATGA

Protein sequence :
MTILRMCELGDISRAGFYRFDPEAEQREEELDLRDAIQRIALEFPCYGRPRITAELRRQGWAVNHKRVGRIMREDNLLCI
RRRKFVCCTTDSNHGLRVYPNLAKKMELTGLDQLWVADITYIRLETEFIYLAVVLDAFSRRVIGWALGRTLEASLAVQAL
KMAFRRRGSVKGLTHHSDRGVQYASKEYTDLLKEHGVQISMSRKGNPYDNAKCESFMKTLKYEEVYRQEYRDLAEAQASV
EKFIEKIYNGKRLHSALGYCSPVEFERSLVPLEQTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-37 42
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-37 42
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-37 42