Gene Information

Name : Acid_6729 (Acid_6729)
Accession : YP_827935.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.99.3
Position : 8432076 - 8433485 bp
Length : 1410 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: aba:Acid345_1381 aldehyde dehydrogenase (NAD+)

DNA sequence : 
ATGTCTCCAATTTCGATCGAAATCTGCAGCCCCGCCACCGGCGAACTCCTTGGCAAGGTGCCGGATTTCGACGCCGAGGC
GGTCGATTGCGCCGTCGCTGCAGCGCGCGCATCTTTCGAGAACAAGACCTGGCGCGGCCTTGATCCCTCCAAACGCGAGC
GCATCCTCTGGAACATCGGCGAACTCCTGCTGAAATATCGCGACGAGCTCTCCAGACTCATCTCCCAGGAAACCGGCAAG
ACCCTTCGCGAAGCCGCCGGGGCGGACGTCGCGCCCGCCGCCGATTGCTTCCATTACTACGCCGGCTGGGTCCGCAAGCA
ATACGGCGAGACCATCCCGGTGGATGGCCCCTACCTGAACTACACGCTGCGCGAACCCGTCGGCGTGGTCGGCGCCATCG
TGCCCTGGAATTTCCCTTTGCAGACCGCCGCGTGGAAAGTCGCCCCGGCGCTTGCTTGCGGCTGCTCCGTCGTGCTCAAG
CCCAGCGAACTGACTCCGCTGAGCGCGCTCCGGTTCGGCGAAATCTGCGCCGAAGCCGGCCTGCCTGCAGGCGTGCTCGT
GGTCGCCACCGGCTACGGCGAGACCACCGGCGAAGCCCTCGCCCTGCACGAGGATGTCGATAAGATCAGCTTTACGGGCA
GCGTCACCACCGCCCGTAAGCTCCTCCAAAACTCCGCTGTCTCTAACCTCAAGCGCCTCAGCCTGGAACTCGGCGGCAAG
TCGCCCAACATCGTTTTTCCAGACGCCGATTTCGATGCCGCCGTCCGCGCTGCCCTGTGGGGTATCTACGGCAACAAAGG
TGAGATGTGCACCGCCGGCTCCCGCCTGCTGCTCCACGAAGAGATCCACGATCGCTTCGTCGAAGAGCTGGCCTCCAAGG
CCCGCAAGCTCCGTCTCGGCAATCCGCTCGACCCCGCCACCCAGATGGGCCCGCAGATCTCCGGCCGCCAGCTGGATCGC
ATCCTCGATTACATCGAGGCCGGCAAAACCGAAGGGGCCCGCCTTGTCTGCGGCGGCGAGCGCGATACCGAGGGCGACAA
GGCCCACGGCTTTTTCGTGAAGCCCACCATCTTCGCCGGCGTGCATCCCGATATGCGAATCGCGCGCGAAGAGATCTTCG
GCCCCGTGCTCTCCGTCATGCGCTTCCGCGACGCCGAAGAGGCGGTCCGCATCGCCAACGCCACCACTTACGGCCTCGCC
TCCGCCGTCTGGACCAACGACCTCAAGCTCGCTCACCGCATGGCCGCCGCCCTCAAGGCCGGCAGCGTCTGGGTTAACAC
CTACAACGCCTTCGACTCCGGCTCGCCTTTTGGCGGCTACAAGCAAAGCGGCTTCGGCCGCGACCTCGGCAGCTACGCCC
TCGATCAATACACCAACGTAAAATCCGTCTGGATCGCGCTCGGCAAATAG

Protein sequence : 
MSPISIEICSPATGELLGKVPDFDAEAVDCAVAAARASFENKTWRGLDPSKRERILWNIGELLLKYRDELSRLISQETGK
TLREAAGADVAPAADCFHYYAGWVRKQYGETIPVDGPYLNYTLREPVGVVGAIVPWNFPLQTAAWKVAPALACGCSVVLK
PSELTPLSALRFGEICAEAGLPAGVLVVATGYGETTGEALALHEDVDKISFTGSVTTARKLLQNSAVSNLKRLSLELGGK
SPNIVFPDADFDAAVRAALWGIYGNKGEMCTAGSRLLLHEEIHDRFVEELASKARKLRLGNPLDPATQMGPQISGRQLDR
ILDYIEAGKTEGARLVCGGERDTEGDKAHGFFVKPTIFAGVHPDMRIAREEIFGPVLSVMRFRDAEEAVRIANATTYGLA
SAVWTNDLKLAHRMAAALKAGSVWVNTYNAFDSGSPFGGYKQSGFGRDLGSYALDQYTNVKSVWIALGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-90 48
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-85 45
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-85 45
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-85 45
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-85 45
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-84 45
hpaE AAO17179.1 HpaE Not tested tcd island Protein 7e-80 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_6729 YP_827935.1 aldehyde dehydrogenase VFG0082 Protein 2e-85 45