Gene Information

Name : Acid_6481 (Acid_6481)
Accession : YP_827690.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 8122893 - 8123600 bp
Length : 708 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0367 ABC transporter, ATPase subunit

DNA sequence : 
ATGGACAACGGCTCGCAACCGCTGATTCGACTGGACGCAGTGAGCAAAGTCTTCGTGACGGACGAAGTGGAAACTCACGC
GCTGCAAAGCATTCACTTTGACGTGAAGAAGGGGGAATACCTCTCGATTTCCGGTCCATCCGGCTGCGGGAAATCGACCC
TGCTGGCCATTCTTGGCCTGCTTGATACTCCCACCGACGGCACTTACTATCTCAACGGGAAACCGGTTACCGGGTTGAAG
CTGAGTGAGCGGGCGCGGATTCGCAATCGCGAGATCGGTTTCATTTTCCAGGCGTTCAACCTTATCGGTGATCTCACCGT
CTATGAGAACGTGGAACTCCCGCTGACTTATCGTGGGATGCCGGGAGCCGAGCGCAAGCGGCGCGTGCAGGATGCCCTGG
AGCGCGTCGGTATGTCGCACCGCATGAAGCACTATCCCAGCCAGCTTTCCGGCGGTCAGCAGCAGCGTGTCGCTGTGGCG
CGCGCATTAAGCGGCGATCCCTTGATCCTGCTCGCCGACGAGCCTACCGGGAACCTGGACTCCGCCAATGGCGAGGCCGT
GATGAGCCTGCTCCGCGAGCTGCATGCGGCCGGCTCGACCATTTGTATGGTGACCCACGATCCGCGCTACGCTGAGTTCG
CCGATCGTACGGTTCGGCTGTTCGACGGACGAATCGTCGAAGAGAATATGGAATCCGCCAAGAACTGA

Protein sequence : 
MDNGSQPLIRLDAVSKVFVTDEVETHALQSIHFDVKKGEYLSISGPSGCGKSTLLAILGLLDTPTDGTYYLNGKPVTGLK
LSERARIRNREIGFIFQAFNLIGDLTVYENVELPLTYRGMPGAERKRRVQDALERVGMSHRMKHYPSQLSGGQQQRVAVA
RALSGDPLILLADEPTGNLDSANGEAVMSLLRELHAAGSTICMVTHDPRYAEFADRTVRLFDGRIVEENMESAKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_6481 YP_827690.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-41 48
Acid_6481 YP_827690.1 ABC transporter-like protein NC_012469.1.7686878. Protein 6e-53 45
Acid_6481 YP_827690.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-38 44
Acid_6481 YP_827690.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-35 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_6481 YP_827690.1 ABC transporter-like protein VFG0869 Protein 2e-21 42