Gene Information

Name : Acid_6406 (Acid_6406)
Accession : YP_827617.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 8023422 - 8024330 bp
Length : 909 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sth:STH1821 recombinase

DNA sequence :
ATGTCTGGAGCGCTCGCGGAAGGTTCGGCGGTTCTGTGCGGCCAGACTGCTGCGTTCCTCAATTTCTGCCGTATCGAGAA
GGGGCTTTCGCCCAATTCGATCTCGGCGTACTCCGCAGATCTCGCTCGTTTTGTTCAATTTACAGGGGATGTCCAGGAGC
CTCCGGGGGTTCCGGAAATCCGCCAATATATCGATCATCTGTACCAAACGGGACTCAGCAACCGGTCGGTAGGCCGGCAT
TTGACCACTTTGCGAAACTTCTACGGGTTCCTGCTCAGGGAGGGTAAGGTCGCCACCGACCCTACCGAGCACCTGCGCAC
CCCCCGGCAGTGGCAGACTATTCCTAAGTATCTGAATCTGGAGGAGATCGAGCGCATTATTCAAGCGCCGGACCTGGCCA
AACCGCTCGGTCTGCGGGACCGGGCCATGATGGAAGTGCTGTACGCTTCCGGTTTGCGGGTGAGTGAACTGTGCAAACTG
GGCATCGGCGACCTGGACCTGGAATACCAGGTTTTGCGGACCACCGGGAAGGGCAACAAGCAGCGCCTGGTGCCGGTCGG
GAAGGCGGCGGTCCTGGCGGTGCGGGCGTACCTGGAATCCGGACGCCCTGGGCTCTTGAAGGGGCGGGCGAGCCGGTACC
TGTTCGTCACCGCGCGCGGCGGATGTATGACGCGGCAGGGTTTTTGGAAACTGTTGGCGGCGTATGGCAGGAAGGCCGGC
ATTTTCCATGGCTTGACGCCGCACGTGCTGCGTCACAGTTTCGCCACCCACCTTTTGGAGGGCGGAGCCGACCTGCGCAG
CGTGCAGGTCATGCTGGGCCATGCCGATATCTCGACCACCCAGATCTACACCCACGTGATGCGCTCGCGACTTCGGGCGA
CCGTGGAGAAGCATCACCCCCGGGCGTGA

Protein sequence :
MSGALAEGSAVLCGQTAAFLNFCRIEKGLSPNSISAYSADLARFVQFTGDVQEPPGVPEIRQYIDHLYQTGLSNRSVGRH
LTTLRNFYGFLLREGKVATDPTEHLRTPRQWQTIPKYLNLEEIERIIQAPDLAKPLGLRDRAMMEVLYASGLRVSELCKL
GIGDLDLEYQVLRTTGKGNKQRLVPVGKAAVLAVRAYLESGRPGLLKGRASRYLFVTARGGCMTRQGFWKLLAAYGRKAG
IFHGLTPHVLRHSFATHLLEGGADLRSVQVMLGHADISTTQIYTHVMRSRLRATVEKHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-50 47
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-50 47