Gene Information

Name : Acid_6284 (Acid_6284)
Accession : YP_827495.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 7892669 - 7893382 bp
Length : 714 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aba:Acid345_2990 two component transcriptional regulator, winged helix family

DNA sequence : 
GTGTGGCTGATAGTCATGAAGAAAATCTTACTAATCGAGGACGACGCAGACCTCTTCTCGCTGCTGAAGTACAACCTGGA
GAAAGAGGGCTTCTCTTTGAGCGGTCAGCACACCGGGAAAGGCGCCATCGAGCTCTGCCGGCAGGTGCGGCCCGACCTCA
TTCTGCTGGATATCATGCTTCCCGATTCGGATGGCCTGGACATCTGCAAAGGCATCCGGAAAGATCCGGATCTGGCCGCG
ATACCCGTAATCTTCCTGACCGCGCGCGCCAGTGAAACCGACCGCATCGTGGGCCTGGAACTGGGCGCCAATGACTACGT
GGTCAAGCCGTTCTTCGTGCGCGAGCTGATTGCGCGAATCAAGCTGCAGTTCCGCAATCAGGCCACCCCGGCGCGCCTGC
TCGAAGCCGGCGGCGTGGAGCTGGACCGGACCAGCTGCCAGGTCCGGCTGAACGGTGTCCCGCTGGCGCTCACCGCCACC
GAATTCCGGCTCCTGGAATTCCTCATGAACCGGCCCGGCGTGGTCTTCAGCCGCGAGCAACTGTTGAATGCCGTCTGGGG
CCAGGATCGTGCGATTACGGACCGGGCAGTGGATGTCTACGTGCTCCGGTTGCGCCAGAAGGTGGAGAAAGATCCAGCCA
GCCCGATTCTGATTCACTCGGTGCGTGGTTTCGGGTACACCTTCGAGCCCCGGCGTTCCATGGCGGCGGTCTAG

Protein sequence : 
MWLIVMKKILLIEDDADLFSLLKYNLEKEGFSLSGQHTGKGAIELCRQVRPDLILLDIMLPDSDGLDICKGIRKDPDLAA
IPVIFLTARASETDRIVGLELGANDYVVKPFFVRELIARIKLQFRNQATPARLLEAGGVELDRTSCQVRLNGVPLALTAT
EFRLLEFLMNRPGVVFSREQLLNAVWGQDRAITDRAVDVYVLRLRQKVEKDPASPILIHSVRGFGYTFEPRRSMAAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-32 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_6284 YP_827495.1 two component transcriptional regulator AE000516.2.gene3505. Protein 8e-31 43
Acid_6284 YP_827495.1 two component transcriptional regulator NC_012469.1.7685629. Protein 3e-30 42
Acid_6284 YP_827495.1 two component transcriptional regulator HE999704.1.gene2815. Protein 3e-34 42
Acid_6284 YP_827495.1 two component transcriptional regulator AE016830.1.gene1681. Protein 1e-37 41
Acid_6284 YP_827495.1 two component transcriptional regulator CP001138.1.gene4273. Protein 9e-24 41
Acid_6284 YP_827495.1 two component transcriptional regulator NC_002695.1.915041.p Protein 5e-24 41
Acid_6284 YP_827495.1 two component transcriptional regulator CP000034.1.gene3834. Protein 5e-24 41
Acid_6284 YP_827495.1 two component transcriptional regulator CP000034.1.gene2186. Protein 3e-25 41
Acid_6284 YP_827495.1 two component transcriptional regulator CP000647.1.gene2531. Protein 2e-25 41
Acid_6284 YP_827495.1 two component transcriptional regulator BAC0596 Protein 4e-25 41
Acid_6284 YP_827495.1 two component transcriptional regulator BAC0039 Protein 3e-25 41
Acid_6284 YP_827495.1 two component transcriptional regulator NC_002695.1.916589.p Protein 2e-25 41
Acid_6284 YP_827495.1 two component transcriptional regulator CP001138.1.gene2239. Protein 4e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_6284 YP_827495.1 two component transcriptional regulator VFG1563 Protein 1e-32 41
Acid_6284 YP_827495.1 two component transcriptional regulator VFG1702 Protein 4e-32 41