Gene Information

Name : Acid_6061 (Acid_6061)
Accession : YP_827280.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Unknown
Product : IstB ATP binding domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 7589517 - 7590134 bp
Length : 618 bp
Strand : +
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: chy:CHY_1116 ISChy4, transposition helper protein

DNA sequence :
GTGCTGGAGAGTGAAGCCCACGTGCGGCAGGAGCGGAACATCAAAGTCCGCACACAACTGGCGGGCTTTCCGGACACTAA
GCGGTTGGAGCAGTTTGACTTCAAGTTCCCGTCCTCCATCGACGAGAAGAAAATCCGCGAACTTGCGAGCCTGCGTTTTC
TGGAGCGCCATGAGAACGCTGTGTTCCTCGGACCGCCCGGGGTGGGCAAGACCCACCTGGCGGTCTCGTTGGGAATGGAG
GCCATTCGTCACGGCTTCAGTGTTTACTTTGTCAGTTTGACGGATCTGCTCGATCGTCTGGTGCAGGCGCAGGCGGAGAA
TCGGATGCGCCGCAAGATGGCGCATCTGCGTAAGTGCCGGCTTTTGATCCTCGATGAGATCGGCTACCGCAGTTTGGATA
AACAGGCGACCACCTGTCTGTTCCAGTTGATCAGCGAACGTTACGAACGCGGCTCGATGATTCTGACCTCCAACAAGAGC
TACGGCGAGTGGGGATCGATCTTTCAGGACAACGTGATCGCCAGCGCGATTCTGGATCGGCTGTTGCACCACTCCCACAC
CGTCAACATCAAGGGCGAAAGCTACCGGCTGAAGGAGAAACGCAAGGCCGGCGTATGA

Protein sequence :
MLESEAHVRQERNIKVRTQLAGFPDTKRLEQFDFKFPSSIDEKKIRELASLRFLERHENAVFLGPPGVGKTHLAVSLGME
AIRHGFSVYFVSLTDLLDRLVQAQAENRMRRKMAHLRKCRLLILDEIGYRSLDKQATTCLFQLISERYERGSMILTSNKS
YGEWGSIFQDNVIASAILDRLLHHSHTVNIKGESYRLKEKRKAGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-46 48
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-46 48
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-46 48
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-46 48
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 3e-46 48
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-46 48
unnamed CAA21402.1 - Not tested HPI Protein 3e-46 48
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-46 48
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-45 48
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-46 48
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 3e-46 48
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 3e-46 48
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 3e-40 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_6061 YP_827280.1 IstB ATP binding domain-containing protein VFG1515 Protein 9e-47 48
Acid_6061 YP_827280.1 IstB ATP binding domain-containing protein VFG1627 Protein 9e-47 48
Acid_6061 YP_827280.1 IstB ATP binding domain-containing protein VFG1606 Protein 9e-47 48
Acid_6061 YP_827280.1 IstB ATP binding domain-containing protein VFG1663 Protein 5e-46 48
Acid_6061 YP_827280.1 IstB ATP binding domain-containing protein VFG1460 Protein 1e-40 47