Gene Information

Name : Acid_5798 (Acid_5798)
Accession : YP_827030.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Resistance
Product : acriflavin resistance protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0841
EC number : -
Position : 7263111 - 7266212 bp
Length : 3102 bp
Strand : -
Note : PFAM: acriflavin resistance protein; KEGG: dde:Dde_0670 transporter, AcrB/D/F family

DNA sequence :
ATGAACCTCGGCGAACTCTCGGTTCAGAAGAACCGGGTGGCTTTCGCACTGATGTTTCTCGTGTTCGCCGGAGGGCTGGT
GGCGTATCACCGGCTGGGTCGCCTCGAGGACCCGGAGTTCACGATCAAGGAAGCGCTGATCATCACTCCATACCCGGGTG
CCAGCGCGGAGGAGGTCGCGAGAGAAGTCACCAACCCCATCGAGAGCGCTTGCCAGCAGCTGGGCCAACTCAAACGCGTC
GAGTCGGAATCGTCACGAGGACGATCGGTGGTGTCGGCCGTCATTCAGGATCGATTCCAAAAGGCCACGATCCCGCAGGT
GTGGGACGAGCTCCGCCGCAAGATCGACGACGTTCAATCCAGATTGCCGCCCTCGGTGCGCGGCAAGTCGATCGTGGTGG
ACGATTTCGGCGATGTGTACGGCGTCTTCCTGGCGATCACCGGGAAGGGATTCTCGCAGCCCGAACTTCGCCGCTACGTG
GAGTTCCTGCGCCGCGAGCTCCTGCTGGTGAACGACGTCAAGAAGGTGGATCTCTTCAGCGAACAGCAGGAGGTGGTCTT
CCTCGAAATTTCCCGCCAGCGGCTGGCGCAACTGGGCATCAACGAAGAGGAGATCTACAGTCAGCTGCAGGCGAAGAATG
TGGCTGCCGACGGCGGACGGCTGCGAGTGGGAGACGAACATATCGCGATCGACCCCACTGGCGGCTTCGGCTCCGCCGAG
GAGATGCTCGAACTGGTGATTGGGTCGGACAGCACGGGCCGCCAACTCTTCCTGAAAGACGTTGCCACGATCAATCGCAC
CTACGAAGATCCGCCGCGCCGGTTGCTCCGGTTCGACGGCCAGCCGGCCATAGGCCTGGGCATCTCCACGGTGCAGGGCG
GCAACGTCGTGACCATGGGCAATGCCGTGCGGCGCAAGCTCGAGGCGTTGAAACACGACCAGCCGGTCGGAATCGAAATC
GGCGACATCAATTTCCAGCCCACGGCGGTCACTAAGGCCACCAACGCCTTCGTGTTCAACCTGGGCAAGGCGGTCACGAT
CGTCTTCGTCGTGCTGCTGTTCGCGATGGGCCGCAGGGCAGGATTGATCATCGGCTGCATCCTGTTCCTCACGATCATGG
GGACGTTCCTGGTGATGTATCTGGACGGCAACCTCTTGATGGAGCGAATTTCTCTTGGCGCCCTCATCATCGCGCTGTGC
ATGCTCACCGACAACGCGATCGTGGTTACGGAAGGGATTCAGGTTCGAATCGAATCCGGTGAAGAGAAGATGCACGTGAT
TCGCGATGTGATCTCGCAGAATCAGTGGCCGCTGTTCGGCGCAACCTCCATCGCGGTGGTGGCGTTTGCGGCGATCGGAC
TATCGGAGGATCGCACCGGCGAGTACTGCAATTCCCTGTTCTGGGTGATTTTCATTTCCCTGGCGCTCAGCTGGGTGGCG
GCGATCACGTTCACGCCCCTGCTGGGCTACCTCATGTTCAAGCCCAAGCCCATCACCGAGACTGAGAGGGATCCTTACGG
CGGGTTACTTTTCCGGACGTACCGCCGGCTGTTGATTGTCGCGCTCCGCTTCCGCTGGCCGGTGTTGGCTGGAACAGCGG
TGCTGTTTGGCGCCGCGCTCTACGGCTTCCGGAGTCTCGATCAAAGTTTTTTCCCTCCGGCGACCAGGCCGCAGTTCATG
GTGGATACATTCCTCCCTTCCGGAACCCACATCCGCGAATCTGAAGCGTATGCCGCCGCGGTGGAGAGTTACCTTCGCGG
CCAGCCAGGGGTCACGCATATTTCGTCGTTCATCGGCGGCGGAGCGCTACGGTTCCTGCTGGTGTACACGCCGGAACGGC
AGAATCCGGCGTTCGTTCAGTTCCTGGTCGAAGTCGATGACGATAAGAGGATCGACGGGCTGATCGCCAACGTTCAGAAG
TATCTGGACAACAACTACCCGGACGGGAACTCCATCGCCAAGAAGTTCCTGCTGGGTCCGGGCAGCGGCGGGCGCATCCA
GGTCCGCTTCCGAGGTCCCGATCATGCGAAGCTGCGCGAGCTGGCCAGCATCGCCGAGGGAATCCTGGATGACGATGGAG
GAGCTATCGGGGTACGCAACGATTGGCGCCAGCGCGAAAAGGTCATCCGCCCGGAGCTTCTCGAACTTCAGGCGCGCCGC
AACGGCATCACTCGCGTCAATGTTGCCCAGGCACTGGAGAGCGGCTTCGAAGGACGGCCGGTCGGCTTCTATCGCGAGCC
GGGCAGCGCCGGGGCCGGAATATTCCCGCGCGAGACGCGCCTGCTGCCGATCGTCGCCCGTCCGCCAGAAAGCGAGCGAA
GCGATGTCGCGGTGATCCCGAGCATGCAGATCTGGAGTCCGGCGGCGCGGCGGATGATCCCGTTGAGCCAGGTCGTCTCG
GGAATCGATGTCGATTGGGAAGACCCTGTGGTGATGCGTCGCAATCGCACTCCAACCATCACGGTGCACGCCGATCCGCG
CCGGGGCCTGCCCAGCCACTTGCTCAATCGGGTGCGGCCGAAACTCGAAGAGATCAAATTGCCTCCCGGCTATGCGCTCG
AGTGGGGCGGCGAGTACGAGGATTCGCAAGAGGCTCGCGCCGCACTGGCCAAGCCTCTTCCGGGAGCGCTGGTGCTGATG
GTGTTCATCGTTGTGTGCCTGTTCAATTCGATCCGCTCCACGCTGGTGATTTGCCTGGCTGTGCCGCTGGCGATCATCGG
CGTCACGGCGGGGCTCCTGATTACCAGGCAGCCGTTCGGCTTCATGGCCTTGCTTGGCGTGATCGCGTTGGCGGGCGAGC
AGATCAAGAACTCGATTGTGCTGGTGGATGAGGTGTACACACAACGCGACGAGGGAAAGACGCCTTACCGGGCGCTTCTC
GACGCCGGCGTGAGCCGGCTGCGGCCGGTACTTCTGGTGGCCGTGACTACCGTGCTGGGGATGATCCCGCTGCTCCAGGA
TCCCTTCTTCGTGGCGATGGCGGCGACCATCATGTTTGGCCTGGCCTTTGCCTGTGTCCTGACCATGATTGTCGTGCCGG
TACTTTACGCGGTCTTCTTTCGAGTGTATGAAGATGCCGGATCGCCGCCGGAGCCGGCGTAG

Protein sequence :
MNLGELSVQKNRVAFALMFLVFAGGLVAYHRLGRLEDPEFTIKEALIITPYPGASAEEVAREVTNPIESACQQLGQLKRV
ESESSRGRSVVSAVIQDRFQKATIPQVWDELRRKIDDVQSRLPPSVRGKSIVVDDFGDVYGVFLAITGKGFSQPELRRYV
EFLRRELLLVNDVKKVDLFSEQQEVVFLEISRQRLAQLGINEEEIYSQLQAKNVAADGGRLRVGDEHIAIDPTGGFGSAE
EMLELVIGSDSTGRQLFLKDVATINRTYEDPPRRLLRFDGQPAIGLGISTVQGGNVVTMGNAVRRKLEALKHDQPVGIEI
GDINFQPTAVTKATNAFVFNLGKAVTIVFVVLLFAMGRRAGLIIGCILFLTIMGTFLVMYLDGNLLMERISLGALIIALC
MLTDNAIVVTEGIQVRIESGEEKMHVIRDVISQNQWPLFGATSIAVVAFAAIGLSEDRTGEYCNSLFWVIFISLALSWVA
AITFTPLLGYLMFKPKPITETERDPYGGLLFRTYRRLLIVALRFRWPVLAGTAVLFGAALYGFRSLDQSFFPPATRPQFM
VDTFLPSGTHIRESEAYAAAVESYLRGQPGVTHISSFIGGGALRFLLVYTPERQNPAFVQFLVEVDDDKRIDGLIANVQK
YLDNNYPDGNSIAKKFLLGPGSGGRIQVRFRGPDHAKLRELASIAEGILDDDGGAIGVRNDWRQREKVIRPELLELQARR
NGITRVNVAQALESGFEGRPVGFYREPGSAGAGIFPRETRLLPIVARPPESERSDVAVIPSMQIWSPAARRMIPLSQVVS
GIDVDWEDPVVMRRNRTPTITVHADPRRGLPSHLLNRVRPKLEEIKLPPGYALEWGGEYEDSQEARAALAKPLPGALVLM
VFIVVCLFNSIRSTLVICLAVPLAIIGVTAGLLITRQPFGFMALLGVIALAGEQIKNSIVLVDEVYTQRDEGKTPYRALL
DAGVSRLRPVLLVAVTTVLGMIPLLQDPFFVAMAATIMFGLAFACVLTMIVVPVLYAVFFRVYEDAGSPPEPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1355 YP_001217299.1 AcrB/AcrD/AcrF family transporter Not tested VPI-2 Protein 0.0 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_5798 YP_827030.1 acriflavin resistance protein BAC0519 Protein 0.0 47
Acid_5798 YP_827030.1 acriflavin resistance protein BAC0428 Protein 0.0 47
Acid_5798 YP_827030.1 acriflavin resistance protein BAC0425 Protein 0.0 44
Acid_5798 YP_827030.1 acriflavin resistance protein BAC0526 Protein 0.0 43