Gene Information

Name : Acid_5001 (Acid_5001)
Accession : YP_826243.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 6308616 - 6310028 bp
Length : 1413 bp
Strand : -
Note : PFAM: pyruvate kinase; KEGG: tfu:Tfu_1179 pyruvate kinase

DNA sequence :
ATGCCAAATACAAAAATTGTAGCCACACTTGGGCCGGCCACAGATGCGCCCGGTGTCTTGCGTCAACTGCTCGCCGCAGG
CGTCGATGTTTTTCGACTGAATGCATCGCACGGAGCACAGGATGCGCATGCCGCGCGGATCGACGCGGTGCGAGCTGCGG
CGCGCGAGGCGCACGTTCACGCCGGGATTCTGCTGGATTTGCAGGGGCCGAAGATCCGGCTCGGGCGCTTTGAAAATGGC
GGAGTGACGCTGGTGACCGACGCCATATTTACGATCACGACAGAGCAGGTGATGGGCACCTCCGAGCGCGCATCGACGGG
CTATTCGCGGTTCGCGAAGGACGTGAAGGCGGGCGATCGCATTCTGCTCGCCGATGGCATCATCGAACTGATCGCGCTCG
AATCGGACGGTGTCAGTGTGCAAACCCGTATCGTGAACGGCGGTCCGATCGGCGACCACAAGGGGATCAATCTTCCGGGG
GTGCAGGTGAGCATTCCCTCTCTGACCGAGAAGGACCTGGCCGATCTGCATTTTGGATTGAACGCCGGAGTCGATATCGT
GGCGCTTTCGTTTGTGCGCACGGCGGACGATGTGCGGCAGTTGCGCGACCGGCTCGGGGGGCGGCCGGTCTCGATTGTCG
CCAAGATCGAAAAGCCGGAGGGCTACGAGAATATCGAGCCGATTCTGGATGTGACGGATGGCGTGATGGTGGCGCGCGGG
GACCTGGGCGTAGAGATTTCGCTGGAGCGTGTGCCGCGAATTCAGAAATCGATCATCCGGCGCGCGCGGCGCAAGGGTCG
GTTCGTGATTACGGCGACGCAGATGCTGGAATCCATGATCGAGAATCCACGGCCCACACGGGCCGAGGTGAGCGATGTCG
CCAATGCGATTTACGATGGCACGGACGCGGTGATGCTGTCGGCGGAGACGTCGGTCGGCAAGTATCCGGTGGAAGCCGTG
CGCTACATGGCGAAGATCGCGGCGGAGAGCGAGGATTCGATTCGCAAGAAGGGATATATCGACCCGCCTCACCAACCGCA
GCCATCGAACGCGGAGATCCTGGCGGATGCGGCGCATCACGCCGCGCGCGATTCGGGGGCGGCGGCGATCGTGGTGTTCA
GTTCGCGCGGATCTAGTGCGCGGCTGGTATCGCGGTACCGTCCGCCGGTAGGGGTGTTCGCGATCACGCCGCACGATACT
ACGGCGCGGCAACTCTCCGTCAGTTACGGCGTGACCCCGCTGCTGGCGCCGGATGTCTCGAGCACGGATGAAATGTTGAG
CCAGATGGACCGCGTGCTCATTGAAGGCGGGTATCTGCAGAAGGGGCAGCTGGTGGTGTTTGTCGCAGGTCAGCCGGTGG
GGCGGCCCGGAACGACGAACCTGATGAAGCTGCATCGCGTGGGTCTGGGATAG

Protein sequence :
MPNTKIVATLGPATDAPGVLRQLLAAGVDVFRLNASHGAQDAHAARIDAVRAAAREAHVHAGILLDLQGPKIRLGRFENG
GVTLVTDAIFTITTEQVMGTSERASTGYSRFAKDVKAGDRILLADGIIELIALESDGVSVQTRIVNGGPIGDHKGINLPG
VQVSIPSLTEKDLADLHFGLNAGVDIVALSFVRTADDVRQLRDRLGGRPVSIVAKIEKPEGYENIEPILDVTDGVMVARG
DLGVEISLERVPRIQKSIIRRARRKGRFVITATQMLESMIENPRPTRAEVSDVANAIYDGTDAVMLSAETSVGKYPVEAV
RYMAKIAAESEDSIRKKGYIDPPHQPQPSNAEILADAAHHAARDSGAAAIVVFSSRGSSARLVSRYRPPVGVFAITPHDT
TARQLSVSYGVTPLLAPDVSSTDEMLSQMDRVLIEGGYLQKGQLVVFVAGQPVGRPGTTNLMKLHRVGLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-74 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-74 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-74 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-74 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_5001 YP_826243.1 pyruvate kinase VFG0479 Protein 4e-75 44