Gene Information

Name : Acid_4408 (Acid_4408)
Accession : YP_825654.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 5578130 - 5578525 bp
Length : 396 bp
Strand : -
Note : PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: aba:Acid345_2957 protein tyrosine phosphatase

DNA sequence : 
GTGCCCAGCGTGTTGATCCTATGTACCGGAAACTCGGCGCGCTCGCAGATGGCCGAGGGCCTGTTCCGCCAGGAGAGCGG
CGGGACGTGGGAAGTCTGCTCGGCGGGAACCCGCCCCACCAAGGTGCGCCCGGAGGCGATTGTGGCGATGCAGGAGATTG
GCATCGACATTTCCAAGCACTGGTCGAAATCGGTGGACGAGTTCGCGGGCAGGGAATTCGACTACGTGATTACGGTGTGC
GATCACGCTAATGCAATTTGTCCGGTGTTTCCAGGAAGGACACATCGATTGCACTGGCCATTCGAGGATCCGGCCGGGAT
CGAAGATTTTCGACGAGTACGTGACGAGATTCACTCCAAGGTTAAGACGGTGCTGGCAAGTGTGATCGCTCCCTAA

Protein sequence : 
MPSVLILCTGNSARSQMAEGLFRQESGGTWEVCSAGTRPTKVRPEAIVAMQEIGIDISKHWSKSVDEFAGREFDYVITVC
DHANAICPVFPGRTHRLHWPFEDPAGIEDFRRVRDEIHSKVKTVLASVIAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 2e-19 47
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 7e-19 44
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 2e-18 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_4408 YP_825654.1 protein tyrosine phosphatase BAC0580 Protein 5e-19 48
Acid_4408 YP_825654.1 protein tyrosine phosphatase BAC0032 Protein 5e-19 47
Acid_4408 YP_825654.1 protein tyrosine phosphatase BAC0581 Protein 4e-17 45