Gene Information

Name : Acid_3636 (Acid_3636)
Accession : YP_824893.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4603753 - 4604505 bp
Length : 753 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aba:Acid345_4562 two component transcriptional regulator, winged helix family

DNA sequence : 
GTGTGTGAAGGCCGCGATTGCGTTACAACTAAAGCAGAAGAAGTGAGTACAACCGACACCACCACCGCGCGACGCTCCAT
CCTCTTAGTAGAGGACGATACTGAGCTCACGTCATTAATGACCGATTATTTCGCGCAGCACGGCTTCCAGGTCGAAGCGG
CCCACGATGGGCGCACCGGCCTGGCGCGCGCCATCGAAGGCTCGTTCGACCTGATCATCCTCGATGTGATGCTGCCCGTG
CTCGATGGGTTCGAAGTTTTGCGCCAGCTTCGCAAACGCAGCGCCACGCCGGTGATCATGCTCACCGCGCGCATCAGCCA
GAGTGACCGCGTGGCCGGCCTTAACTCCGGCGCCGACGATTACCTGCCCAAGCCCTTCGGTCCCGACGAACTGCTGGCGC
GCATTCGCGCCGTGCTGCGCCGCACCGGCCACACCGATGCCGCGCCGCCGCAGATCGTGGAATCGGCGGGCCTGCGCATC
GACCCCGCGGCGCGCGCGGTTTGGGATCACGGCGAGGCCATCGAGATCACTTCCATCGAATTCGACATCCTGGAGATTCT
GGTGCGCTCGGCGGGACGCACGGTGACCCGCGACGAACTCACCGCGGTCCTCTACCAGCGGCCCGCGACTCCTTACGAGC
GCTCGCTCGATGTCCACATCAGCCACCTGCGCAAGAAGCTCGAGCGCGACGATCGCTCCGTGATCCGCACCATCCGCGGC
GTCGGCTATCAATTCATGGCGGGTGAGCGATGA

Protein sequence : 
MCEGRDCVTTKAEEVSTTDTTTARRSILLVEDDTELTSLMTDYFAQHGFQVEAAHDGRTGLARAIEGSFDLIILDVMLPV
LDGFEVLRQLRKRSATPVIMLTARISQSDRVAGLNSGADDYLPKPFGPDELLARIRAVLRRTGHTDAAPPQIVESAGLRI
DPAARAVWDHGEAIEITSIEFDILEILVRSAGRTVTRDELTAVLYQRPATPYERSLDVHISHLRKKLERDDRSVIRTIRG
VGYQFMAGER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_3636 YP_824893.1 two component transcriptional regulator CP000675.2.gene1535. Protein 2e-50 50
Acid_3636 YP_824893.1 two component transcriptional regulator CP001485.1.gene721.p Protein 1e-44 46
Acid_3636 YP_824893.1 two component transcriptional regulator CP004022.1.gene3215. Protein 9e-41 45
Acid_3636 YP_824893.1 two component transcriptional regulator BAC0533 Protein 5e-36 44
Acid_3636 YP_824893.1 two component transcriptional regulator CP000647.1.gene4257. Protein 5e-36 44
Acid_3636 YP_824893.1 two component transcriptional regulator CP001138.1.gene4273. Protein 1e-35 42
Acid_3636 YP_824893.1 two component transcriptional regulator NC_002695.1.915041.p Protein 1e-35 42
Acid_3636 YP_824893.1 two component transcriptional regulator CP000034.1.gene3834. Protein 1e-35 42
Acid_3636 YP_824893.1 two component transcriptional regulator AE000516.2.gene3505. Protein 2e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_3636 YP_824893.1 two component transcriptional regulator VFG1390 Protein 2e-32 43
Acid_3636 YP_824893.1 two component transcriptional regulator VFG0596 Protein 5e-31 41