Gene Information

Name : Acid_3574 (Acid_3574)
Accession : YP_824831.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4524884 - 4525726 bp
Length : 843 bp
Strand : -
Note : PFAM: Integrase, catalytic region; KEGG: gvi:glr0077 transposase

DNA sequence : 
ATGAGTGTCGTGCAGATGTGCGAGTCGCTGGGCATCAGCCGGGCAGGATACTACCGCTTTTTGGATCCGGAAAAGCCGGC
ACCCGCCGATATGGATCTTCGCGACGAGATGCACCGGGTAGCCCTCGATTGGCCCTGCTATGGGAGCCGGCGTATCGTCG
AGGAACTCAAGGCTCGTGGATGGGAGGTCAACCGCAAGCGGATTCAGCGGCTGATGCGGGAAGACAACCTGCTGTGTGTG
ATCAAACGCAAGTTCGTCGTAGCCACCACCGATTCCCGTCACGGTCTGAAGGTATATCCGAATCGGGCCGCGGAGATGAC
GCTAACCGGAGTCGATCAGCTCTGGGTGGCCGATATCACCTACATCCGACTGGAAGAGGAGTTTGTCTACCTGGCGGTCA
TTCTGGATGCCTTCTCACGCCGGGTCATTGGCTGGCATTTGGGGGAAACCTTAGAAGTTTCCCTCACGCTGAATGCCTTG
CGCATGGCGCTTGGGCAACGATCGGTAAGTCCGGGCCTGGTTCACCACTCCGACCGCGGAGTCCAGTATGCCAGTCACGA
TTACACGCAACTGCTCCAGGACAACGGGATCGAAATCAGCATGAGTCGCAAGGCCAACCCCTGGGACAATGCGGCCTGCG
AGTCCTTCATGAAAACGCTGAAATACGAGGAGGTACACCGCACCGAATATCGGAATCTGGCACACGCCCGTGCGTCGATA
AAGACCTTCCTGGAGAAGATCTATAACCAAAAGCGATTGCACTCGTCCTTGAGCTATCGCTCGCCGGTCGAGTTCGAACA
CTCTCTAGCGGCCACCGCTTCTCAGCAGCAGGTGGCGGTATGA

Protein sequence : 
MSVVQMCESLGISRAGYYRFLDPEKPAPADMDLRDEMHRVALDWPCYGSRRIVEELKARGWEVNRKRIQRLMREDNLLCV
IKRKFVVATTDSRHGLKVYPNRAAEMTLTGVDQLWVADITYIRLEEEFVYLAVILDAFSRRVIGWHLGETLEVSLTLNAL
RMALGQRSVSPGLVHHSDRGVQYASHDYTQLLQDNGIEISMSRKANPWDNAACESFMKTLKYEEVHRTEYRNLAHARASI
KTFLEKIYNQKRLHSSLSYRSPVEFEHSLAATASQQQVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-36 45
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-36 45
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-36 45
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-34 41
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 9e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_3574 YP_824831.1 integrase catalytic subunit VFG1706 Protein 5e-35 41