Gene Information

Name : Acid_2278 (Acid_2278)
Accession : YP_823552.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2909775 - 2912246 bp
Length : 2472 bp
Strand : +
Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: aba:Acid345_3573 ATPase AAA-2

DNA sequence :
ATGTTTGAGCGTTATACGGAGAAGGCGCGTAGGGTGATCTTCTTCGCGCGGTATGAAGCCAGCCAGTTCGGCAGTCCGTA
CATCGAGACCGAACACCTGCTCCTCGGCCTGCTGCGAGAAGATAAGGCGCTGGCAAACCGCTTTCTGCGGTCTCATGCCG
CGGTGGAGAGCATCCGAAAACAGATTGAAGGCCATACCACAATCCGGGAAAAGGTCTCCACCAGTGTCGACTTGCCGCTC
AGTCACGAGTGCAAGCGCGTCCTGGCCTACGGAGCCGAAGAAGCCGAACGGTTAAGCCACAAGCACATCGGCACCGAGCA
CCTGCTGCTCGGGCTGCTGCGCGAAGAGAAGTGTTTCGCCGCGGAGATCCTCCACGAACGCGGCCTGCGCCTTTCCACCA
TCCGCGAGGAGCTGGCGCGCTCGCAGAGTGAGAAGGTAGCGTCCGCCCGGCCCAAGGAGAGTTCGCTGCTGGCCGAGTTC
AGCCGCGATCTCACCCAGGCCGCGATGGACAACACGCTGGACCCGCTCATCGGGCGTGATTACGAGTTGGAACGGGTAGT
CCAGATCCTCTGCCGCCGCACCAAGAACAACCCGGTGTTGATCGGCGAACCCGGCGTGGGCAAAACCGCCATTGTCGAAG
GCCTGGCGCAGCGCATTGCCGAAGGCGATGTGCCCTCGTTCCTGGCCGACAAGCGCATCCTGGCGCTCGATCTTTCCCTG
ATCGTCGCCGGCACCAAGTACCGGGGCCAGTTCGAAGAGCGCCTCAAGACCATCATGAAGGAGCTGATGGAGAATCAGAA
CGCCATCATCTTCATCGACGAGCTGCATACGCTCGTGGGCGCAGGCTCCGCCGAAGGCTCGTTGGACGCCGCCAACATCC
TGAAGCCCGCCCTCTCGCGCGGCGAAATCCAGTGCATCGGCGCCACCACCCCTGCCGAATTCCGCAAGTCCATCGAGAAG
GATCGTTCGCTCGAGCGCCGCTTCCAGGCCGTCAAGGTGCCTCCGCCAAATGAAAGCGACGCTATCAAGATCCTCTTCGG
TATCAAGGACCGCTACGAGAAGTTCCACGCCGTCGCCTATACCGACGACGCCATCGAGGCCGCGGTCTACACCTCCAGCC
GCTACATTCCGGACCGCTACCTGCCGGACAAGGCCATCGATCTGATCGATGAAGCCGGCGCGCGCGTCAAACTGCGGCAG
ACCACGCTGCCCGCCGACCTCGCCGATATCCAGAAGCGCATCAAGTTCATCGTGCACCGCATGGAGAACGCGATCGCCAA
TCACGAGTTCGAAAAGGCGCGCTTTTATAGCGACGAAGAACGCAAGGAGCGCGAGAACATGCGCCTCCTCCGCGAGAAGT
ATAACCTGGACGATTCCTCCACCGGCTGCGTCACCAAGGACGACATCGAAGACGTGGTCGCCCGCTGGACCGGCGTTCCG
ATGACCTCCATCAAGGAAGAGGAAATTGCCAAGCTGCTGCGCATCGAAGAAGAGTTGCACAAGCGCGTCATCAGCCAGGA
GAAAGCCATCTCCGCGCTGGCCCGCGCCATCCGCCGCTCCCGCGCCGGACTGAAGGCGAGCAATCGCCCCGCCGGCAGCT
TCTTGTTCCTGGGACCCACCGGCGTCGGCAAAACCGAGGTCGCCCGTGCCCTGGCCGGCTTCCTCTTCGGCAGCGAGAAG
AGCCTGGTGCGCTTCGATATGTCGGAGTACATGGAGAAGCACTCGGTCAGCAAGCTGATCGGTTCGCCTCCCGGCTACGT
CGGCTACGAAGAGGGCGGCCAGCTCACCGAGCGCGTCAAGCGCAATCCCTATTCGATCATCCTGCTCGACGAAATCGAGA
AGGCGCATCCGGATATTTACAACATCCTGCTGCAGGTCTTTGAAGACGGCCAGTTGACCGACGGTCTCGGCAACCAGGTC
GATTTCAAGAACACGATCATCATCATGACCAGCAACCTGGGCGCCCGCTTCCTCGAGAAGCGCGGCAACCTGGGCTTCTC
GATCCCGGCCGGTGAAGCCGGCTCCACCAAGGTCGAGGATATGGTCCGCAGCGAGGTCAAGAAGGCGTTCAATCCCGAAT
TCCTCAACCGCCTCGATGAAGTCATTCTCTTCATGTCGCTGACGGATCCGGACCTGATCCAGATCATGGAACTGCTGGTG
CAGCAGGTGAACGTCAACCTGGTGGCCAAGCAGGTCAAGATCCATCTGGCCCCGGACGCCGCCAAGTACATTCTGGAGAA
GACCTGCGCCGACCGCAGCTATGGCGCCCGGCCCCTGCGCCGCGCGCTGCAGAAGTACATCGAAGACCCGCTCAGCGAGG
CGCTCATCCAGGGCACCCTGCCTCGTCCGGCGGATCTCGAGGTCTACCTCGGCGACACCGGCATCTACTATCGCGTGATG
AACGCGGAAGGCGATGCCGAAGTGACGGTCCCGGCCGAACCCCCGGTCGGAACGCTGCTCTACACGTTTTAG

Protein sequence :
MFERYTEKARRVIFFARYEASQFGSPYIETEHLLLGLLREDKALANRFLRSHAAVESIRKQIEGHTTIREKVSTSVDLPL
SHECKRVLAYGAEEAERLSHKHIGTEHLLLGLLREEKCFAAEILHERGLRLSTIREELARSQSEKVASARPKESSLLAEF
SRDLTQAAMDNTLDPLIGRDYELERVVQILCRRTKNNPVLIGEPGVGKTAIVEGLAQRIAEGDVPSFLADKRILALDLSL
IVAGTKYRGQFEERLKTIMKELMENQNAIIFIDELHTLVGAGSAEGSLDAANILKPALSRGEIQCIGATTPAEFRKSIEK
DRSLERRFQAVKVPPPNESDAIKILFGIKDRYEKFHAVAYTDDAIEAAVYTSSRYIPDRYLPDKAIDLIDEAGARVKLRQ
TTLPADLADIQKRIKFIVHRMENAIANHEFEKARFYSDEERKERENMRLLREKYNLDDSSTGCVTKDDIEDVVARWTGVP
MTSIKEEEIAKLLRIEEELHKRVISQEKAISALARAIRRSRAGLKASNRPAGSFLFLGPTGVGKTEVARALAGFLFGSEK
SLVRFDMSEYMEKHSVSKLIGSPPGYVGYEEGGQLTERVKRNPYSIILLDEIEKAHPDIYNILLQVFEDGQLTDGLGNQV
DFKNTIIIMTSNLGARFLEKRGNLGFSIPAGEAGSTKVEDMVRSEVKKAFNPEFLNRLDEVILFMSLTDPDLIQIMELLV
QQVNVNLVAKQVKIHLAPDAAKYILEKTCADRSYGARPLRRALQKYIEDPLSEALIQGTLPRPADLEVYLGDTGIYYRVM
NAEGDAEVTVPAEPPVGTLLYTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-171 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid_2278 YP_823552.1 ATPase VFG0079 Protein 1e-179 49
Acid_2278 YP_823552.1 ATPase VFG0080 Protein 2e-137 49