Gene Information

Name : Acid_2011 (Acid_2011)
Accession : YP_823286.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 2545122 - 2545787 bp
Length : 666 bp
Strand : +
Note : PFAM: alanine racemase domain protein; KEGG: aba:Acid345_4204 protein of unknown function UPF0001

DNA sequence :
ATGGAAGGACTTACGGAAAGACTGACCGCTGTCCGCCTCCGCATCGAGCGCGCCGCCGAGCACGCCCGCCGCAATCCGGC
GGAAATTCTCCTGCTGGCCGTCACCAAGATCTTCCCCGCCTCCGCCATCCGCGAGGCCTACGATCTGGGACTTCGTGACT
TCGGCGAAAACTACGTCCAGGAATTCGAGGGCAAGGCCCCCGAAGTCGCCGGCCTGCCCGGCGCGCGCTTCCACCTGATC
GGCCACCTGCAATCCAACAAATCGTCCAAGGCCGCCGAACTCTTCCATTCCATTCAGACCGTGGACTCCGCCAAACTCGC
ACGCCGCCTCAACGAAAGCGGCCGCCCCCTCGACGTCATGATCGAAGTCAAACTCTCCGGCGAGGATGCCAAGAGCGGCG
TCGATCCCGCCCAGCTCCCCGACCTCATCCAGGCCACCCGCGCCTGCCCCAACCTGAACCTCCGCGGCCTCATGACCATG
CCGCCGTGGAGCGAAGATCCCGAAGCGCCGCGCGCCATCTTCCGCACCTTGCGCGAACTTGCCGCCGAGCACGGTCTGCC
GGGCCTTTCCATGGGAATGTCCAACGACCTGGAGACCGCCATCGAGGAAGGCTCCACCTGCGTGCGCGTCGGCACCGCCC
TCTTCGGACGCCGGAACAAGCCGTGA

Protein sequence :
MEGLTERLTAVRLRIERAAEHARRNPAEILLLAVTKIFPASAIREAYDLGLRDFGENYVQEFEGKAPEVAGLPGARFHLI
GHLQSNKSSKAAELFHSIQTVDSAKLARRLNESGRPLDVMIEVKLSGEDAKSGVDPAQLPDLIQATRACPNLNLRGLMTM
PPWSEDPEAPRAIFRTLRELAAEHGLPGLSMGMSNDLETAIEEGSTCVRVGTALFGRRNKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 5e-27 41
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 5e-27 41
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 5e-27 41
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 5e-27 41