Gene Information

Name : Acid_1739 (Acid_1739)
Accession : YP_823014.1
Strain : Candidatus Solibacter usitatus Ellin6076
Genome accession: NC_008536
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2160337 - 2161071 bp
Length : 735 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: hch:HCH_00808 short-chain alcohol dehydrogenase-like protein

DNA sequence :
ATGATCGTGACCGGCGGCGGGCGAGGGATCGGCGCCTGCACGGCGCGGTTGGCGGGCGCGCGCGGATATGCGGTCGGCGT
CAACTACCTGCGCGATCGCGACGCTGCGGCGGGCGTGGCGGATTCCATCGAGCAGGCCGGCGGCAACGCAATCGCGGTGC
AGGCCGATATCGGAGTGGAAGCCGACGTCCTCCGCCTGTTCGAGACGGTGGAGAAAGAGTTGGGACGGCCGGCGGCGCTG
GTGAACAACGCAGCTCGGTTGGAGCAGCAGATGCGTTTGGAAGCGATGGACCCGGCACGGCTGCACCGGATGTTCGCGAC
CAACGCGGTGGGCACGATGCTCTGTTCGCGGGAGGCGGTGCGCCGCATGTCCCGGCGCCGCGGAGGCGAGGGCGGAGCGA
TCGTGAACGTGTCCTCGGGCGCGGCGCGCTACGGCTCGCCGGGCGAGTATGTGGACTACGCGGCGACCAAGGGCGCGGTG
GAGACGTTCACAGTCGGACTGGCCCGCGAGGTCGCCGAAGAAGGAATTCGCGTCAACGGCGTGAGGCCGGGTTTCATCTA
TACGGAAATGCACGCCGCGGGCGGAGAGCCGGGGCGGGTGGATCGCGTGAAGTCGCTGGTGCCGATGCAGCGCGGCGGCC
AACCGGAAGAAGTGGCGTCGGCGATTCTCTGGCTGCTCTCCGACGAGGCGTCGTACGTAACGGGCACGTTTATCGATGTG
GCGGGTGGGCGTTAG

Protein sequence :
MIVTGGGRGIGACTARLAGARGYAVGVNYLRDRDAAAGVADSIEQAGGNAIAVQADIGVEADVLRLFETVEKELGRPAAL
VNNAARLEQQMRLEAMDPARLHRMFATNAVGTMLCSREAVRRMSRRRGGEGGAIVNVSSGAARYGSPGEYVDYAATKGAV
ETFTVGLAREVAEEGIRVNGVRPGFIYTEMHAAGGEPGRVDRVKSLVPMQRGGQPEEVASAILWLLSDEASYVTGTFIDV
AGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 2e-58 59
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 2e-53 58