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Name : nplT (SPD_0927) Accession : YP_816405.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Unknown Product : neopullulanase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.135 Position : 939476 - 941239 bp Length : 1764 bp Strand : + Note : equivalent gene in S.pneumoniae R6 = spr0948; identified by match to protein family HMM PF00128; match to protein family HMM PF02903 DNA sequence : ATGAATACTTTAGGAGACAAATTGATGGAATTGAGTGCTATTTACCATGGGCCTGAGTCGGAGTATGCCTATCTTTATAA GGATAAGAAACTCCATATTCGAATTCGAACTAAGAAAGGGGACATTGAAAGCATCAACTTGCACTATGGGGACCCTTTTA TCTTTATGGAGGAGTTTTATCAGGATACAAAAGAAATGGTCAAGATAACTTCTGGTACCTTATTTGACCATTGGCAGGTT GAAGTGTCAGTTGACTTTGCACGTATCCAGTATCTCTTTGAGCTCAGAGATACAGAAGGTCAAAATATTTTGTATGGCGA TAAAGGGTGTGTGGAAAATTCTCTAGAAAATCTTCATGCAATTGGGAATGGATTTAAGTTGCCTTATCTTCATGAGATTG ATGCCTGCAAGGTTCCTGACTGGGTTTCAAATACGGTATGGTATCAGATATTTCCTGAAAGATTTGCCAATGGCAATGCT CTATTAAACCCAGAAGGGACTTTAGACTGGGATTCATCTGTCACACCTAAGAGCGATGATTTCTTTGGTGGTGATTTACA GGGGATTATTGATCATATGGATTACTTGCAAGACTTGGGTATTACTGGACTATATCTTTGTCCCATCTTTGAATCTACAA GCAATCACAAGTACAATACGACAGATTACTTTGAAATTGACCGTCATTTTGGAGACAAGGAGACCTTTCGGGAACTGGTG GATCAAGCGCATCATCGTGGCATGAAAGTCATGCTGGATGCGGTATTTAATCATATTGCTTCGCAATCTCTTCAATGGAA AAATGTCGTCAAAAATGGTGAACAGTCTGCTTATAAGGATTGGTTCCATATTCAACAATTCCCAGTGACAACTGAAAAGC TAGTTAATAAGAGAGACTTACCCTATCATGTTTTTGGTTTCGAGGACTATATGCCTAAGCTAAATACAGCCAATCCAGAG GTCAAGAATTATCTTTTAAAGGTTGCGACTTATTGGATTGAAGAGTTTAATATCGATGCTTGGCGTTTGGATGTGGCTAA TGAGATTGACCATCAGTTCTGGAAGGATTTTCGTAAGGCAGTTTTAGCTAAAAATCCTGATCTTTATATCCTAGGAGAAG TCTGGCATACATCTCAGCCTTGGCTAAATGGAGATGAGTTCCATGCCGTCATGAATTATCCTTTATCTGATAGTATCAAG GACTATTTCTTACGAGGAATTAAGAAGACAGACCAGTTCATCGATGAAATCAATGGAGAGTCTATGTATTACAAGCAGCA GATTTCAGAGGTCATGTTTAATCTCTTGGATTCACATGATACAGAGCGAATCCTGTGGACGGCCAATGAAGATGTTCAAC TGGTTAAATCAGCCTTAGCCTTTCTCTTTTTACAAAAAGGAACACCGTGCATTTATTACGTAACCGAGCTAGCCTTGACT GGAGGACCAGATCCAGATTGTCGTCGTTGTATGCCTTGGGAACGTGTATCAAGTGACAATGATATGCTGAACTTTATGAA GAGGCTGATTAAGATTCGGAAATACGCGTCAGTAATCATTTCGCATGGCAAGTATAGCCTTCAAGAAATCAACTCTGATC TAGTAGCTCTGGAATGGAAATACGAAGGACGGATCCTCAAAGCAATATTCAACCAATCAACAGAAGATTATCTTTTAGAG AAAGAAGCAGTAGCACTAGCAAGCAATTGCCAAGAATTGGATAATCAGCTTGTCATCTCTCCAGATGGATTTATGATTTT CTAA Protein sequence : MNTLGDKLMELSAIYHGPESEYAYLYKDKKLHIRIRTKKGDIESINLHYGDPFIFMEEFYQDTKEMVKITSGTLFDHWQV EVSVDFARIQYLFELRDTEGQNILYGDKGCVENSLENLHAIGNGFKLPYLHEIDACKVPDWVSNTVWYQIFPERFANGNA LLNPEGTLDWDSSVTPKSDDFFGGDLQGIIDHMDYLQDLGITGLYLCPIFESTSNHKYNTTDYFEIDRHFGDKETFRELV DQAHHRGMKVMLDAVFNHIASQSLQWKNVVKNGEQSAYKDWFHIQQFPVTTEKLVNKRDLPYHVFGFEDYMPKLNTANPE VKNYLLKVATYWIEEFNIDAWRLDVANEIDHQFWKDFRKAVLAKNPDLYILGEVWHTSQPWLNGDEFHAVMNYPLSDSIK DYFLRGIKKTDQFIDEINGESMYYKQQISEVMFNLLDSHDTERILWTANEDVQLVKSALAFLFLQKGTPCIYYVTELALT GGPDPDCRRCMPWERVSSDNDMLNFMKRLIKIRKYASVIISHGKYSLQEINSDLVALEWKYEGRILKAIFNQSTEDYLLE KEAVALASNCQELDNQLVISPDGFMIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SPN23F_09660 | YP_002510949.1 | alpha-amylase | Not tested | PPI-1 | Protein | 0.0 | 99 |
