|
Name : SPD_0915 (SPD_0915) Accession : YP_816393.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Virulence Product : iron-compound ABC transporter iron compound-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0614 EC number : - Position : 927770 - 928795 bp Length : 1026 bp Strand : + Note : equivalent gene in S.pneumoniae TIGR4 = SP1032; equivalent gene in S.pneumoniae R6 = spr0934; identified by match to protein family HMM PF01497 DNA sequence : ATGAAAAACAAATTTTTTCTAATAGCTATTTTAGCTATGTGTATAGTTTTTAGCGCTTGTTCTTCTAATTCTGTTAAAAA TGAAGAAAATACTTCTAAAGAGCATGCGCCTGATAAAATAGTTTTAGATCATGCTTTCGGTCAAACTATATTAGATAAAA AACCTGAAAGAGTTGCAACTATTGCTTGGGGAAATCATGATGTAGCATTAGCTTTAGGAATAGTTCCTGTTGGATTTTCA AAAGCAAATTACGGTGTAAGTGCTGATAAAGGAGTTTTACCATGGACAGAAGAAAAAATCAAAGAACTAAATGGTAAAGC TAACCTATTTGACGATTTGGATGGACTTAACTTTGAAGCAATATCAAATTCTAAACCAGATGTTATCTTAGCAGGTTATT CTGGTATAACTAAAGAAGATTATGACACTCTATCAAAAATTGCTCCTGTAGCAGCATACAAATCTAAACCTTGGCAAACT TTATGGAGAGATATGATTAAAATTGATTCAAAAGCCTTAGGTATGGAAAAAGAAGGTGATGAGTTAATCAAAAATACTGA AGCTCGTATATCCAAAGAATTAGAAAAACATCCAGAAATCAAAGGAAAAATCAAAGGAAAAAAAGTATTATTTACTATGA TTAATGCTGCAGATACATCAAAATTCTGGATTTATACTAGCAAAGATCCAAGAGCAAATTATTTAACAGATTTAGGTCTA GTTTTCCCTGAATCATTAAAAGAATTTGAGAGTGAAGATAGTTTTGCAAAGGAAATTTCTGCAGAAGAAGCAAATAAGAT AAATGATGCTGATGTAATCATAACTTATGGTGATGATAAAACTCTTGAAGCTTTACAAAAAGATCCTCTTTTAGGTAAAA TAAATGCAATTAAAAATGGTGCCGTTGCTGTAATTCCAGATAATACACCGTTAGCAGCCTCATGCACTCCAACACCACTT TCAATAAACTATACTATTGAAGAATACCTAAATCTTTTAGGAAATGCATGCAAAAATGCGAAATAA Protein sequence : MKNKFFLIAILAMCIVFSACSSNSVKNEENTSKEHAPDKIVLDHAFGQTILDKKPERVATIAWGNHDVALALGIVPVGFS KANYGVSADKGVLPWTEEKIKELNGKANLFDDLDGLNFEAISNSKPDVILAGYSGITKEDYDTLSKIAPVAAYKSKPWQT LWRDMIKIDSKALGMEKEGDELIKNTEARISKELEKHPEIKGKIKGKKVLFTMINAADTSKFWIYTSKDPRANYLTDLGL VFPESLKEFESEDSFAKEISAEEANKINDADVIITYGDDKTLEALQKDPLLGKINAIKNGAVAVIPDNTPLAASCTPTPL SINYTIEEYLNLLGNACKNAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SPN23F_09530 | YP_002510936.1 | iron-siderophore binding lipoprotein | Virulence | PPI-1 | Protein | 1e-153 | 100 |
| SP_1032 | NP_345507.1 | iron-compound ABC transporter iron compound-binding protein | Virulence | PPI-1 | Protein | 1e-153 | 100 |
