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Name : SPD_0802 (SPD_0802) Accession : YP_816286.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Unknown Product : S1 RNA-binding domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 817281 - 819410 bp Length : 2130 bp Strand : + Note : equivalent gene in S.pneumoniae TIGR4 = SP0908; equivalent gene in S.pneumoniae R6 = spr0808; identified by match to protein family HMM PF00575 DNA sequence : ATGGATAAAAAATATGAAAAAATCTCTCAGGATTTGGGAGTGACGTTAAAGCAAATTGATACCGTTCTAAGTTTGACAGC TGAAGGGGCGACTATTCCCTTTATCGCGCGTTATCGCAAGGACATGACTGGTAGTCTGGATGAGGTGGCGATTAAGGCTA TTATTGATTTGGATAAAAGTCTGACAAATCTCAATGACCGTAAGGAAGCTGTCTTAGCTAAGATTCAAGAACAAGGTAAG TTGACCAAGGAATTGGAAGAAGCTATCTTAGTTGCCGAAAAATTAGCAGACGTTGAAGAACTCTATCTTCCTTATAAGGA AAAGCGTCGTACCAAGGCAACCATTGCCCGTGAAGCTGGACTCTTTCCTCTTGCTCGTTTGATTTTGCAGAATATAGTTG ACTTAGAGAAAGAAGCTGAAAAGTTCGTCTGTGAAGGATTTGCGACTGGCAAGGAAGCCTTGACCGGTGCAGTTGATATT TTGGTCGAAGCCTTATCGGAAGATGTGACCTTGCGTTCTATGACTTATCAGGAAGTGCTGAGACACTCTAAACTCACTTC TCAAGCCAAGGATGAAAGTCTTGATGAAAAGCAGGTTTTTCAGATTTATTATGATTTTTCAGAGACAGTTGGAACTATGC AAGGCTATCGTACCTTGGCTCTCAATCGTGGGGAGAAACTTGGTGTCTTGAAGATCGGTTTTGAACATGCGACGGACCGT ATTCTTGCCTTCTTTGCTACTCGTTTCAAGGTGAAAAATGCTTATATTGATGAAGTTGTTCAGCAATCCGTTAAGAAAAA GGTCTTGCCTGCTATTGAGCGTCGTATTCGGACAGAATTAACTGAGAAAGCTGAAGAGGGAGCTATCCAACTTTTTTCTG ACAATCTGCGCAATCTCCTCTTGGTTGCTCCACTGAAAGGGCGCGTGGTTCTTGGATTTGACCCAGCCTTTCGTACAGGT GCCAAGTTAGCTGTCGTGGATGCAACAGGAAAAATGCTGACAACTCAGGTTATTTATCCTGTTAAACCAGCATCAGCTCG TCAAATCGAAGAAGCCAAGAAAGATTTAGCAGATTTAATTGGTCAATACGGTGTAGAGATTATTGCCATTGGAAATGGAA CGGCCAGTCGTGAAAGTGAAGCTTTTGTAGCGGAAGTTCTGAAAGATTTCCCTGAAGTCAGCTATGTTATCGTTAATGAA AGTGGTGCTTCTGTCTATTCTGCCAGCGAACTTGCTCGTCAGGAGTTTCCAGACTTGACCGTTGAAAAACGCTCTGCCAT TTCTATCGCCCGTCGTTTGCAAGATCCTCTTGCGGAATTGGTCAAAATCGATCCTAAGTCAATTGGTGTCGGTCAATACC AACACGATGTCAGTCAGAAGAAACTATCTGAGAGTCTGGACTTTGTTGTCGATACAGTGGTTAACCAAGTTGGTGTCAAT GTCAATACAGCTAGCCCAGCTCTTCTTTCACACGTAGCTGGACTCAACAAAACTATCTCTGAAAATATTGTCAAATACCG CGAGGAAGAAGGAAAAATCACTTCACGCGCCCAAATCAAGAAAGTTCCTCGTCTGGGAGCCAAGGCCTTTGAGCAGGCTG CTGGTTTCCTTCGTATCCCTGAAAGTAGCAATATCCTTGATAATACAGGAGTTCACCCAGAGAATTACACTGCAGTTAAG GAACTCTTCAAACGTTTAGATATTAAAGACCTAAACGAAGAAGCCCAAAGCAAACTCAAGTCCCTTTCAGTCAAGGAAAT GGCTCAAGAGCTAGACCTCGGTCCAGAAACCCTTAAAGATATCATTGCAGATCTTCTCAAACCAGGTCGAGATTTCCGTG ATTCCTTTGACGCACCTGTGCTTCGCCAAGATGTCCTAGATATCAAAGACCTAGTGGTAGGTCAGAAGCTAGAAGGTGTT GTGCGTAACGTTGTTGACTTCGGTGCCTTCGTTGATATCGGGATTCACGAGGACGGCTTGATTCATATTTCTCATATGAG TCGCAAGTTTATCAAACACCCTAGTCAAGTGGTGTCAGTTGGAGATTTGGTGACCGTTTGGGTCAAGAAAATTGATACTG AACGTGAAAAAGTTAATCTGTCGCTCCTCGCTCCAAATGAAACTGACTGA Protein sequence : MDKKYEKISQDLGVTLKQIDTVLSLTAEGATIPFIARYRKDMTGSLDEVAIKAIIDLDKSLTNLNDRKEAVLAKIQEQGK LTKELEEAILVAEKLADVEELYLPYKEKRRTKATIAREAGLFPLARLILQNIVDLEKEAEKFVCEGFATGKEALTGAVDI LVEALSEDVTLRSMTYQEVLRHSKLTSQAKDESLDEKQVFQIYYDFSETVGTMQGYRTLALNRGEKLGVLKIGFEHATDR ILAFFATRFKVKNAYIDEVVQQSVKKKVLPAIERRIRTELTEKAEEGAIQLFSDNLRNLLLVAPLKGRVVLGFDPAFRTG AKLAVVDATGKMLTTQVIYPVKPASARQIEEAKKDLADLIGQYGVEIIAIGNGTASRESEAFVAEVLKDFPEVSYVIVNE SGASVYSASELARQEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSESLDFVVDTVVNQVGVN VNTASPALLSHVAGLNKTISENIVKYREEEGKITSRAQIKKVPRLGAKAFEQAAGFLRIPESSNILDNTGVHPENYTAVK ELFKRLDIKDLNEEAQSKLKSLSVKEMAQELDLGPETLKDIIADLLKPGRDFRDSFDAPVLRQDVLDIKDLVVGQKLEGV VRNVVDFGAFVDIGIHEDGLIHISHMSRKFIKHPSQVVSVGDLVTVWVKKIDTEREKVNLSLLAPNETD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 3e-133 | 45 |
