|
Name : SPD_0066 (SPD_0066) Accession : YP_815518.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Unknown Product : PTS system transporter subunit IIB Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3444 EC number : - Position : 67629 - 68105 bp Length : 477 bp Strand : + Note : equivalent gene in S.pneumoniae TIGR4 = SP0061; equivalent gene in S.pneumoniae R6 = spr0060; identified by match to protein family HMM PF03830 DNA sequence : ATGACAATTGTAGGATGCCGTATTGATGGACGTTTGATCCACGGACAAGTAGCCAATCTTTGGGCTGGAAAACTAAATGT TTCACGCATTATGGTTGTAGACGACGAAGTTGTCAACAACGATATTGAAAAGAGTGGTTTGAAACTTGCGACACCACCAG GTGTGAAATTGAGTATTTTGCCAGTTGAGAAAGCTGCAGCCAATATTCTTGCTGGTAAATACGATAGCCAACGTCTCTTT ATCGTGGCTCGTAAACCAGACCGCTTCCTTGGTTTGGTAGAAGCAGGTGTACCACTTGAAACCCTTAATGTTGGGAATAT GTCTCAAACACCAGAAACTCGTTCTATTACACGTTCTATCAACGTAGTAGACAAGGATGTGGAAGACTTCCACAAACTGG CAGAAAAAGGTGTTAAACTTACTGCTCAGATGGTTCCAAATGATCCAATTTCAGACTTTTTGAGCTTATTAAAATAG Protein sequence : MTIVGCRIDGRLIHGQVANLWAGKLNVSRIMVVDDEVVNNDIEKSGLKLATPPGVKLSILPVEKAAANILAGKYDSQRLF IVARKPDRFLGLVEAGVPLETLNVGNMSQTPETRSITRSINVVDKDVEDFHKLAEKGVKLTAQMVPNDPISDFLSLLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0554 | NP_814324.1 | PTS system transporter subunit IIB | Not tested | Not named | Protein | 3e-23 | 41 |
| ef0080 | AAM75284.1 | EF0080 | Not tested | Not named | Protein | 2e-23 | 41 |
