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Name : SPD_0642 (SPD_0642) Accession : YP_816137.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Unknown Product : sodium-dependent transporter Function : - COG functional category : R : General function prediction only COG ID : COG0733 EC number : - Position : 662111 - 663496 bp Length : 1386 bp Strand : - Note : This gene may encode a frameshift. The COOH end is frameshifted relative to the TIGR4 ortholog. equivalent gene in S.pneumoniae TIGR4 = SP0737; equivalent gene in S.pneumoniae R6 = spr0648; identified by match to protein family HMM PF00209 DNA sequence : ATGGTTTTCTTGACAGACCTTAGAAAACATAATAGGATAGTCAAGTCTATCAATCAAACAGAAGGCTATTTGACAACTCA AGTAGCTTTTTCTTATTTTGAAAAAGGAGATCAGAGTTTAACTATGTCAGAAAAATCACAATGGGGGTCGAAACTTGGCT TTATTCTAGCATCTGCTGGCTCGGTCATCGGGCTTGGTTCCGTTTGGAAGTTTCCCTACATGACTGCTGCTAATGGCGGT GGAGGCTTTTTACTAATCTTTCTCATTTCCACTATTTTAATCGGTTTCCCTCTCCTGCTGGCTGAGTTTGCCCTTGGCCG TAGTGCTGGCGTTTCCGCTATCAAAACCTTTGGAAAACTGGGCAAGAATAACAAGTACAACTTTATCGGTTGGATTGGCG CCTTTGCCCTCTTTATCCTCTTATCTTTTTACAGTGTTATCGGAGGATGGATTCTAGTCTATCTAGGTATTGAGTTTGGG AAATTGTTCCAACTTGGTGGAACGGGTGATTATGCTCAGTTATTTACTTCAATCATTTCAAATCCAGCCATTGCTCTAGG AGCTCAAGCGACCTTTATCCTATTGAATATCTTCATTGTATCACGTGGGGTTCAAAAAGGGATTGAAAGAGCTTCGAAAG TCATGATGCCCCTGCTCTTTATCATCTTTGTCGTCATCATCGAACGCTCTCTCAGTTTGCCAAATGCCATGGAAGGGGTT CTTTACTTCCTCAAACCAGATTTTTCAAAACTGACTAGCGCTGGTCTCCTCTATGCTCTGAGACAATCTTTCTTTGCCCT CTCACTAGGGGTTACAGCCATGTTGACCTATGCTTCTTACTTGGACAAGAAAACCAATCTGGTCCAGTCAAGAATCTCCA TCGTAGCCATGAATATCTCGGTATCCATCATGGCAGGTCTAGCCATTTTCCAAGCTCGGTCCCCCTTCAATATCCAGTCT GAAGGGGGACCGAGCTTGGTCTTTATCGTCTTGCCTCAACTCTTTGACAAGATGCCTTTTGGAACCATTTTCTATGTCCT CTTCCTCTTTGCGACTGTCACTTCTTCTGTCGTTATGCTGGAAATCAATGTAGACAATATCACCAATCAGGACAACAGCA AGCGTGCTAAATGGAGTGTTATTTTAGGAATTTTGACCTTTGTCTTTGGCATTCCTTCAGCCCTATCTTACGGTGTCATG GCGGATGTTCACATTTTTGGTAAAGCCTTCTTTGACGCTATGGACTTCTTGGTTTCCAATCTCCTCATGCCATTTGGAGC TCTCTTCCTTTCACTTTTTACAGGCTATATCTTTAAAAAGGCTCTTGCAATGGAGGAACTCCATCTCGATGAAAGAGCAT GGAAACAAGGACTGTTCCAAGTCTGA Protein sequence : MVFLTDLRKHNRIVKSINQTEGYLTTQVAFSYFEKGDQSLTMSEKSQWGSKLGFILASAGSVIGLGSVWKFPYMTAANGG GGFLLIFLISTILIGFPLLLAEFALGRSAGVSAIKTFGKLGKNNKYNFIGWIGAFALFILLSFYSVIGGWILVYLGIEFG KLFQLGGTGDYAQLFTSIISNPAIALGAQATFILLNIFIVSRGVQKGIERASKVMMPLLFIIFVVIIERSLSLPNAMEGV LYFLKPDFSKLTSAGLLYALRQSFFALSLGVTAMLTYASYLDKKTNLVQSRISIVAMNISVSIMAGLAIFQARSPFNIQS EGGPSLVFIVLPQLFDKMPFGTIFYVLFLFATVTSSVVMLEINVDNITNQDNSKRAKWSVILGILTFVFGIPSALSYGVM ADVHIFGKAFFDAMDFLVSNLLMPFGALFLSLFTGYIFKKALAMEELHLDERAWKQGLFQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0458 | YP_039907.1 | sodium:neurotransmitter symporter family protein | Not tested | vSa¥á | Protein | 1e-78 | 50 |
| SAS0416 | YP_042543.1 | sodium:neurotransmitter symporter family protein | Not tested | vSa¥á | Protein | 1e-78 | 50 |
