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Name : SPD_1967 (SPD_1967) Accession : YP_817355.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Unknown Product : IS1381, transposase OrfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3293 EC number : - Position : 1936309 - 1936698 bp Length : 390 bp Strand : + Note : equivalent gene in S.pneumoniae TIGR4 = SP1086; equivalent gene in S.pneumoniae R6 = spr1947; identified by match to protein family HMM PF01609 DNA sequence : ATGAAGGCTCAAGCGATTGTCACAAGTCAAGGGAGAATTGTTTCTTTGGATATCGCTGTGAACTATAGTCATGATATGAA GTTGTTCAAAATGAGTCGTAGAAATATCGAACAAGCTGGTAAAATCTTGGCTGACAGTGGTTATCAAGGGCTCATGAAGA TATATCCTCAAGTACAAACTCCACGTAAATCCAGCAAACTCAAGCCGCTAACAGCTGAAAATAAAGCCTATAACCATGCG CTATCTAAGGAAAGAAGCAAGGTTGAGAACATCTTTGCCAAAGTAAAAACGTTTAAAATATTTTCAACAACCTATCGAAA TCATCGTAAACGCTTCGGATTACGAATGAATTTGAGTGCTGGTATTATCAATCATGAACTAGGATTCTAG Protein sequence : MKAQAIVTSQGRIVSLDIAVNYSHDMKLFKMSRRNIEQAGKILADSGYQGLMKIYPQVQTPRKSSKLKPLTAENKAYNHA LSKERSKVENIFAKVKTFKIFSTTYRNHRKRFGLRMNLSAGIINHELGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1693 | YP_003446795.1 | transposase orfB, IS1381 | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-51 | 89 |
