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Name : SPD_1906 (SPD_1906) Accession : YP_817295.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Unknown Product : IS1381, transposase OrfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3293 EC number : - Position : 1878589 - 1878978 bp Length : 390 bp Strand : - Note : equivalent gene in S.pneumoniae TIGR4 = SP1086; equivalent gene in S.pneumoniae R6 = spr1891; identified by match to protein family HMM PF01609 DNA sequence : ATGAAGGCTCAAGCGATTGTCACAAGTCAAGGGAGAATTGTTTCTTTGGATATCGCTGTGAACTATAGTCATGATATGAA GTTGTTCAAAATGAGTCGTAGAAATATCGAACAAGCTGGTAAAATCTTGGCTGACAGTGGTTATCAAGGGCTCATGAAGA TATATCCTCAAGTACAAACTCCACGTAAATCCAGCAAACTCAAGCCGCTAACAGCTGAAAATAAAGCCTATAACCATGCG CTATCTAAGGAAAGAAGCAAGGTTGAGAACATCTTTGCCAAAGTAAAAACGTTTAAAATATTTTCAACAACCTATCGAAA TCATCGTAAACGCTTCGGATTACGAATGAATTTGATTGCTGGTATTATCAATCATGAACTAGGATTCTAG Protein sequence : MKAQAIVTSQGRIVSLDIAVNYSHDMKLFKMSRRNIEQAGKILADSGYQGLMKIYPQVQTPRKSSKLKPLTAENKAYNHA LSKERSKVENIFAKVKTFKIFSTTYRNHRKRFGLRMNLIAGIINHELGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1693 | YP_003446795.1 | transposase orfB, IS1381 | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-51 | 90 |
