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Name : proV (SPD_1643) Accession : YP_817093.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Unknown Product : choline transporter Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 1658026 - 1658754 bp Length : 729 bp Strand : - Note : equivalent gene in S.pneumoniae TIGR4 = SP1861; equivalent gene in S.pneumoniae R6 = spr1678; identified by match to protein family HMM PF00005 DNA sequence : ATGATTGAATACAAAAATGTAGCACTGCGCTACACAGAAAAGGATGTCTTGAGAGATGTCAACTTACAGATTGAGGATGG GGAATTTATGGTTTTAGTAGGGCCTTCTGGGTCAGGTAAGACGACCATGCTCAAGATGATTAACCGTCTTTTGGAACCAA CTGATGGAAATATTTATATGGATGGGAAGCGCATCAAAGACTATGATGAGCGTGAACTTCGTCTTTCTACTGGTTATGTT TTACAGGCTATTGCTCTCTTTCCCAATCTAACAGTTGAGGAAAATATTGCTCTCATTCCTGAAATGAAGGGTTGGACTAA GGAAGAAATTGCTCAAAAAACAGAAGAGCTTTTGGCTAAGGTTGGTTTACCAGTAGCTGAGTATGGGCATCGACTTCCAA GTGAGCTATCTGGTGGAGAACAGCAACGGGTCGGTATTGTCCGAGCTATGATTGGTCAGCCCAAGATTCTCCTCATGGAT GAACCCTTTTCAGCCTTGGATGCTATTTCTCGCAAGCAGTTGCAGGTTCTGACAAAAGAATTACATAAAGAGTTTGGGAT GACAACGATTTTTGTGACTCATGATACGGATGAAGCCTTAAAGTTGGCAGATCGTATTGCTGTCTTGCAGGATGGAGAGA TTCGTCAGGTGTCGAATCCTGAGACTATTTTAAAAGCTCCTGCAACAGACTTTGTTGCAGACTTGTTTGGAGGTAGTATT CATGACTAA Protein sequence : MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYMDGKRIKDYDERELRLSTGYV LQAIALFPNLTVEENIALIPEMKGWTKEEIAQKTEELLAKVGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKILLMD EPFSALDAISRKQLQVLTKELHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEIRQVSNPETILKAPATDFVADLFGGSI HD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 7e-45 | 46 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-45 | 46 |
