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Name : SPD_1496 (SPD_1496) Accession : YP_816952.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Unknown Product : PTS system transporter subunit IIBC Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1263 EC number : 2.7.1.69 Position : 1512216 - 1513733 bp Length : 1518 bp Strand : - Note : equivalent gene in S.pneumoniae TIGR4 = SP1684; equivalent gene in S.pneumoniae R6 = spr1528; identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826 DNA sequence : ATGTTTAAAGTTTTACAAAAAGTTGGAAAAGCTTTTATGTTACCTATAGCTATACTTCCTGCAGCAGGTCTACTTTTGGG GATTGGTGGTGCACTTTCAAACCCAACCACGATAGCAACTTATCCAATACTAGACAATAGTATTTTTCAATCGATATTCC AAGTAATGAGCTCTGCAGGAGAGGTTGTATTCAGTAATTTGTCACTACTTCTCTGTGTGGGATTATGTATTGGCTTAGCG AAACGAGATAAAGGAACCGCTGCGTTAGCAGGAGTAACTGGTTACTTAGTTATGACTGCAACGATCAAAGCTTTGGTAAA ACTTTTTATGGCAGAAGGATCTGCAATTGATACTGGAGTTATTGGAGCATTAGTTGTCGGAATAGTTGCCGTATATTTGC ACAACCGATATAACAATATTCAATTACCTTCCGCTTTAGGATTCTTTGGAGGTTCACGCTTCGTTCCTATTGTTACATCG TTCTCTTCTATCTTGATTGGCTTTGTCTTCTTTGTTATTTGGCCACCTTTCCAACAACTTCTTGTTTCTACAGGTGGATA TATTTCTCAGGCGGGTCCAATTGGAACTTTTCTATATGGATTTTTAATGAGACTTTCTGGAGCAGTAGGCTTACATCATA TAATTTACCCTATGTTTTGGTATACTGAACTTGGTGGTGTTGAAACTGTTGCAGGACAAACAGTGGTTGGAGCTCAAAAA ATATTTTTTGCTCAATTAGCCGATCCGGCCCATTCTGGATTATTTACAGAAGGAACAAGGTTTTTTGCAGGTCGTTTCTC AACAATGATGTTCGGTTTACCGGCTGCCTGTTTAGCGATGTACCATAGTGTTCCTAAAAATCGTCGTAAAAAATACGCGG GTTTGTTTTTTGGAGTTGCTTTAACATCTTTTATTACCGGTATTACAGAACCAATTGAATTTATGTTTCTATTCGTCAGT CCGGTTCTATATGTTGTTCACGCATTCCTTGATGGTGTTAGCTTCTTTATTGCAGACGTCTTAAATATTTCAATAGGAAA CACATTTTCAGGAGGTGTAATCGATTTCACATTATTTGGAATTTTGCAGGGGAACGCTAAGACGAATTGGGTTCTTCAGA TTCCATTTGGACTTATTTGGAGTGTTTTGTATTATATTATTTTTAGATGGTTCATTACTCAATTCAACGTTCTAACGCCA GGACGAGGAGAAGAAGTAGATTCTAAAGAAATTTCTGAATCCGCAGATTCAACTTCAAATACTGCAGATTATTTAAAACA GGATAGCCTACAAATTATCAGAGCCTTGGGTGGATCAAATAATATAGAAGATGTAGATGCTTGTGTGACACGTTTACGTG TAGCTGTAAAAGAAGTTAATCAAGTTGATAAAGCACTTTTAAAACAAATTGGTGCAGTTGATGTCTTAGAAGTGAAGGGT GGCATTCAAGCAATCTATGGAGCAAAAGCAATCTTATATAAAAATAGTATTAATGAAATTTTAGGTGTAGATGATTAA Protein sequence : MFKVLQKVGKAFMLPIAILPAAGLLLGIGGALSNPTTIATYPILDNSIFQSIFQVMSSAGEVVFSNLSLLLCVGLCIGLA KRDKGTAALAGVTGYLVMTATIKALVKLFMAEGSAIDTGVIGALVVGIVAVYLHNRYNNIQLPSALGFFGGSRFVPIVTS FSSILIGFVFFVIWPPFQQLLVSTGGYISQAGPIGTFLYGFLMRLSGAVGLHHIIYPMFWYTELGGVETVAGQTVVGAQK IFFAQLADPAHSGLFTEGTRFFAGRFSTMMFGLPAACLAMYHSVPKNRRKKYAGLFFGVALTSFITGITEPIEFMFLFVS PVLYVVHAFLDGVSFFIADVLNISIGNTFSGGVIDFTLFGILQGNAKTNWVLQIPFGLIWSVLYYIIFRWFITQFNVLTP GRGEEVDSKEISESADSTSNTADYLKQDSLQIIRALGGSNNIEDVDACVTRLRVAVKEVNQVDKALLKQIGAVDVLEVKG GIQAIYGAKAILYKNSINEILGVDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0067 | AAM75272.1 | EF0067 | Not tested | Not named | Protein | 1e-132 | 58 |
