|
Name : psaC (SPD_1462) Accession : YP_816918.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Resistance Product : manganese ABC transporter permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 1477337 - 1478185 bp Length : 849 bp Strand : + Note : equivalent gene in S.pneumoniae TIGR4 = SP1649; equivalent gene in S.pneumoniae R6 = spr1493; identified by match to protein family HMM PF00950 DNA sequence : ATGATTGCAGAATTTATCGATGGATTGCAAAAATTCCATTTCCTACAAAATGCCTTGATAACAGCTATTGTCGTCGGGAT TGTAGCTGGAGCTGTGGGATGTTTCATTATTCTACGCGGGATGTCACTCATGGGAGATGCCATTTCACATGCTGTCTTAC CAGGTGTAGCCCTCTCCTTCATCTTGGGCCTTGACTTCTTTATCGGAGCCATTGTCTTTGGATTGCTAGCTGCCATCATC ATTACCTACATCAAAGGAAACTCGATTATCAAAAGCGATACCGCCATCGGCATTACCTTTTCTTCTTTCTTAGCCCTCGG TATCATCTTGATTGGTGTCGCTAAAAGTTCAACTGACCTTTTCCATATCCTTTTTGGTAATATCCTGGCCGTCCAAGATA CGGATATGTTTATTACTATGGGTGTGGGGGCAGCCATCCTCTTGTTAATCTGGATTTTCTTCAAGCAACTCTTGATAACT TCCTTTGATGAACTCTTGGCTAAAGCCATGGGAATGCCTGTCAATTTCTATCACTACCTTCTCATGGTACTCCTGACTCT CGTGTCTGTGACAGCCATGCAAAGTGTCGGAACTATCCTGATTGTAGCCATGCTGATTACCCCAGCTGCAACTGCTTATC TGTATGCTAATAGTCTGAAAAGCATGATTTTCCTTTCCTCAACCTTCGGAGCTACTGCTTCAGTTTTGGGACTCTTTATT GGCTATAGTTTTAATGTTGCGGCAGGTTCTAGTATCGTGCTTACAGCTGCTAGTTTCTTTCTCATTAGCTTCTTTATCGC TCCCAAACAACGATATTTGAAACTGAAAAATAAACATTTGTTAAAATAA Protein sequence : MIAEFIDGLQKFHFLQNALITAIVVGIVAGAVGCFIILRGMSLMGDAISHAVLPGVALSFILGLDFFIGAIVFGLLAAII ITYIKGNSIIKSDTAIGITFSSFLALGIILIGVAKSSTDLFHILFGNILAVQDTDMFITMGVGAAILLLIWIFFKQLLIT SFDELLAKAMGMPVNFYHYLLMVLLTLVSVTAMQSVGTILIVAMLITPAATAYLYANSLKSMIFLSSTFGATASVLGLFI GYSFNVAAGSSIVLTAASFFLISFFIAPKQRYLKLKNKHLLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0576 | NP_814341.1 | cation ABC transporter permease | Not tested | Not named | Protein | 7e-82 | 79 |
| ef0094 | AAM75297.1 | EF0094 | Not tested | Not named | Protein | 5e-82 | 79 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| psaC | YP_816918.1 | manganese ABC transporter permease | BAC0442 | Protein | 5e-34 | 41 |
