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Name : psaB (SPD_1461) Accession : YP_816917.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Resistance Product : manganese ABC transporter ATP-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1121 EC number : - Position : 1476618 - 1477340 bp Length : 723 bp Strand : + Note : equivalent gene in S.pneumoniae TIGR4 = SP1648; equivalent gene in S.pneumoniae R6 = spr1492; identified by match to protein family HMM PF00005 DNA sequence : ATGATACGTATCGAAAACCTCAGTGTCTCCTACAAAGAAACGTTGGCACTTAAGGATATTTCACTAGTGCTCCATGGACC AACAATTACCGGCATCATTGGTCCAAACGGCGCTGGGAAATCAACACTATTAAAAGGTATGCTGGGAATTATCCCACATC AAGGTCAGGCATTTCTCGATGACAAGGAAGTTAAAAAATCCTTACACCGAATTGCCTATGTCGAACAAAAAATCAATATC GACTACAACTTTCCCATCAAGGTCAAGGAATGCGTCTCGTTAGGACTATTTCCCTCTATTCCTCTCTTTCGAAGTTTAAA GGCTAAACATTGGAAGAAAGTGCAAGAGGCCCTTGAAATCGTCGGCCTAGCTGACTACGCTGAACGTCAAATTAGTCAAC TGTCTGGAGGTCAATTCCAGCGGGTCTTGATTGCCAGATGTTTGGTGCAGGAAGCCGACTATATCCTCTTGGATGAACCC TTTGCTGGGATTGACTCTGTCAGTGAGGAAATCATCATGAATACGCTGAGAGATTTGAAAAAAGCTGGGAAGACGGTTCT CATCGTTCACCACGACCTCAGCAAGATTCCCCACTACTTCGATCAAGTCTTACTTGTCAATCGAGAAGTGATTGCCTTTG GTCCAACAAAAGAAACTTTTACCGAAACCAATCTAAAAGAAGCTTACGGTAATCAACTCTTTTTCAATGGAGGTGACCTA TGA Protein sequence : MIRIENLSVSYKETLALKDISLVLHGPTITGIIGPNGAGKSTLLKGMLGIIPHQGQAFLDDKEVKKSLHRIAYVEQKINI DYNFPIKVKECVSLGLFPSIPLFRSLKAKHWKKVQEALEIVGLADYAERQISQLSGGQFQRVLIARCLVQEADYILLDEP FAGIDSVSEEIIMNTLRDLKKAGKTVLIVHHDLSKIPHYFDQVLLVNREVIAFGPTKETFTETNLKEAYGNQLFFNGGDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0575 | NP_814340.1 | cationic ABC transporter ATP-binding protein | Not tested | Not named | Protein | 1e-67 | 57 |
| ef0093 | AAM75296.1 | EF0093 | Not tested | Not named | Protein | 9e-68 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| psaB | YP_816917.1 | manganese ABC transporter ATP-binding protein | BAC0400 | Protein | 5e-39 | 42 |
