Gene Information

Name : SPD_1438 (SPD_1438)
Accession : YP_816895.1
Strain : Streptococcus pneumoniae D39
Genome accession: NC_008533
Putative virulence/resistance : Resistance
Product : cadmium resistance transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4300
EC number : -
Position : 1455772 - 1456386 bp
Length : 615 bp
Strand : -
Note : equivalent gene in S.pneumoniae TIGR4 = SP1625; equivalent gene in S.pneumoniae R6 = spr1466; identified by match to protein family HMM PF03596; match to protein family HMM TIGR00779

DNA sequence : 
ATGGGACAGACAATCATATCTGCTATTGGTGTTTATATTTCCACCAGTATCGATTATTTAATTATTTTAATTATTTTATT
TGCACAGCTATCACAGAATAAACAGAAATGGCATATTTATGCGGGGCAATATCTAGGCACAGGCTTACTTGTAGGGGCGA
GTTTAGTTGCTGCTTATGTCGTTAATTTCGTGCCTGAAGAATGGATGGTTGGATTGCTTGGTTTAATCCCTATCTATTTA
GGGATTCGCTTTGCAATTGTTGGAGAAGATGCGGAAGAAGAAGAGGAAGAAATTATTGAAAGATTAGAACAAAGCAAGGC
AAATCAACTGTTTTGGACAGTTACATTGCTGACAATTGCGTCTGGCGGAGATAATTTAGGTATCTATATACCTTATTTTG
CTTCGTTAGATTGGTCACAGACCCTCGTGGCCTTGCTTGTGTTTGTAATCGGCATAATTATCTTTTGCGAGATTAGTCGG
GTGTTATCCTCTATTCCGTTAATATTCGAGACAATTGAAAAATACGAGCGAATCATTGTGCCCTTAGTATTCATTCTACT
TGGACTATACATCATGTATGAAAATGGCACGATAGAGACTTTTCTGATCGTGTAG

Protein sequence : 
MGQTIISAIGVYISTSIDYLIILIILFAQLSQNKQKWHIYAGQYLGTGLLVGASLVAAYVVNFVPEEWMVGLLGLIPIYL
GIRFAIVGEDAEEEEEEIIERLEQSKANQLFWTVTLLTIASGGDNLGIYIPYFASLDWSQTLVALLVFVIGIIIFCEISR
VLSSIPLIFETIEKYERIIVPLVFILLGLYIMYENGTIETFLIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47611.1 DS RF Not tested Type-III SCCmec Protein 2e-28 48
unnamed BAC57486.1 hypothetical protein DSRF Not tested Type-IIIinv SCCmec Protein 2e-28 48
cadD YP_252014.1 cadmium binding protein CadD Not tested SCCmec Protein 2e-23 45
SERP2221 YP_189776.1 cadmium resistance family protein Not tested vSe1 Protein 4e-22 44
cadD YP_254238.1 cadmium binding protein CadD Not tested ¥ðSh1 Protein 5e-17 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPD_1438 YP_816895.1 cadmium resistance transporter BAC0057 Protein 2e-23 44