Gene Information

Name : SPD_1297 (SPD_1297)
Accession : YP_816763.1
Strain : Streptococcus pneumoniae D39
Genome accession: NC_008533
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1315899 - 1316774 bp
Length : 876 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGACTGAAAATCGTTATGAACTAAATAAAAACTTGGCACAGATGCTCAAGGGTGGTGTTATTATGGATGTGCAGAATCC
TGAACAGGCTCGTATCGCAGAAGCTGCTGGTGCGGCAGCTGTGATGGCCTTGGAACGAATTCCGGCTGATATTCGTGCAG
CTGGAGGAGTTTCCCGCATGAGCGACCCAAAGATGATTAAGGAAATCCAAGAAGCGGTTAGTATTCCAGTAATGGCTAAG
GTCAGAATCGGGCATTTTGTTGAAGCTCAGATTTTAGAGGCTATTGAAATTGATTATATCGACGAGAGTGAAGTTCTATC
TCCAGCTGATGACCGTTTCCATGTGGACAAGAAAGAATTCCAAGTTCCTTTTGTCTGTGGTGCTAAGGATTTGGGTGAAG
CCTTGCGTCGTATCGCTGAAGGTGCTTCCATGATTCGTACTAAAGGAGAACCAGGGACAGGGGATATAGTCCAAGCTGTT
CGTCATATGCGTATGATGAATCAGGAAATTCGCCGCATTCAAAACTTACGTGAGGACGAGCTTTATGTTGCTGCCAAGGA
TTTGCAAGTCCCTGTAGAATTGGTCCAATATGTTCATGAACATGGAAAATTGCCAGTTGTAAATTTCGCTGCTGGAGGTG
TTGCAACGCCAGCAGATGCTGCGTTAATGATGCAATTAGGGGCAGAGGGGGTCTTTGTCGGTTCAGGTATTTTCAAGTCA
GGAGATCCTGTTAAACGAGCGAGTGCCATTGTTAAGGCTGTGACTAACTTCCGTAATCCTCAAATCCTAGCTCAAATCTC
TGAAGATTTAGGAGAAGCCATGGTTGGTATTAATGAAAATGAAATCCAAATTCTCATGGCTGAACGAGGAAAATAG

Protein sequence :
MTENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRMSDPKMIKEIQEAVSIPVMAK
VRIGHFVEAQILEAIEIDYIDESEVLSPADDRFHVDKKEFQVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAV
RHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKS
GDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQILMAERGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 7e-78 66
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-78 66
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-78 66