|
Name : SPD_1272 (SPD_1272) Accession : YP_816738.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Unknown Product : IS66 family Orf2 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 1299317 - 1299667 bp Length : 351 bp Strand : - Note : equivalent gene in S.pneumoniae TIGR4 = SP1442; equivalent gene in S.pneumoniae R6 = spr1298; identified by match to protein family HMM PF05717 DNA sequence : ATGACAATTCATCTATCTAGCCTAGGGCAGGTCTATCTCGTGTGTGGGAAGACTGATATGAGACAAGGAATCGATTCACT GGCTTATCTGGTTAAAACCCACTTTGAATTGGATCCTTTCTCCGGTCAAGTTTTTCTCTTTTGTGGTGGACGTAAAGACC GCTTTAAAGCCCTTTACTGGGATGGTCAAGGATTTTGGCTACTATATAAACGCTTTGAGAACGGCAGACTGACTTGGCCC AGTACAGAAAAGGATGTCAAAGCTCTCACACCTGAACAAGTAGATTGGCTTATGAAGGGCTTTTCTATCACTCCCAAAAT AAATTTATCAGAAAGTCGTGATTTCTATTGA Protein sequence : MTIHLSSLGQVYLVCGKTDMRQGIDSLAYLVKTHFELDPFSGQVFLFCGGRKDRFKALYWDGQGFWLLYKRFENGRLTWP STEKDVKALTPEQVDWLMKGFSITPKINLSESRDFY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BCAM0247 | YP_002232879.1 | putative transposase | Not tested | BcenGI11 | Protein | 9e-15 | 47 |
| c3561 | NP_755436.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 1e-10 | 43 |
| ECUMN_3327 | YP_002414007.1 | putative transposase ORF2, IS66 family | Not tested | Not named | Protein | 1e-10 | 43 |
| hp4 | AAC61716.1 | Hp4 | Not tested | PAI I CFT073 | Protein | 4e-10 | 42 |
| c3578 | NP_755453.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 6e-10 | 42 |
| unnamed | AAL99258.1 | unknown | Not tested | LEE | Protein | 4e-10 | 42 |
| Z4336 | NP_289561.1 | hypothetical protein | Not tested | OI-122 | Protein | 6e-10 | 42 |
| unnamed | ACU09438.1 | IS66 family element orf2 | Not tested | LEE | Protein | 4e-10 | 42 |
| Z5097 | NP_290248.1 | prophage-associated protein | Not tested | LEE | Protein | 6e-10 | 42 |
| pB171ORF50 | CAD66190.1 | ORF50 protein of pB171 | Not tested | PAI III 536 | Protein | 2e-11 | 42 |
| ECs4546 | NP_312573.1 | hypothetical protein | Not tested | LEE | Protein | 6e-10 | 42 |
| aec52 | AAW51735.1 | Aec52 | Not tested | AGI-3 | Protein | 1e-11 | 42 |
| unnamed | ADD91739.1 | hypothetical protein | Not tested | PAI-I AL862 | Protein | 1e-11 | 42 |
| unnamed | AAC31493.1 | L0014 | Not tested | LEE | Protein | 4e-10 | 42 |
| Z1132 | NP_286667.1 | hypothetical protein | Not tested | TAI | Protein | 4e-09 | 42 |
| Z1571 | NP_287075.1 | hypothetical protein | Not tested | TAI | Protein | 4e-09 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SPD_1272 | YP_816738.1 | IS66 family Orf2 | VFG1698 | Protein | 4e-11 | 43 |
| SPD_1272 | YP_816738.1 | IS66 family Orf2 | VFG1709 | Protein | 2e-10 | 42 |
| SPD_1272 | YP_816738.1 | IS66 family Orf2 | VFG1665 | Protein | 6e-12 | 42 |
| SPD_1272 | YP_816738.1 | IS66 family Orf2 | VFG0792 | Protein | 2e-10 | 42 |
