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Name : SPD_1264 (SPD_1264) Accession : YP_816730.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 1292755 - 1294476 bp Length : 1722 bp Strand : + Note : equivalent gene in S.pneumoniae TIGR4 = SP1435; equivalent gene in S.pneumoniae R6 = spr1290; identified by match to protein family HMM PF00005 DNA sequence : ATGAAAGAGTTTTATAAAAAAAGATTTGCTCTTACAGATGGAGGAGCAAGAAATTTAAGTAAAGCAACACTGGCTTCATT TTTCGTTTATTGTATAAACATGCTTCCTGCCATATTACTTATGATTTTTGCTCAGGAAGTTTTGGAAAATATGGGCAAAA GCAATGGCTTTTATATAGTATTCTCAGTTTTGACTTTGATAGCAATGTATATTTTGCTTTCTATCGAATACGATAAATTA TATAACACAACCTATCAAGAAAGTGCAGATTTAAGAATAAGGACAGCGGAGAATTTATCAAAATTACCTCTATCTTACTT TTCTAAACATGACATTTCCGACATTTCACAAACAATCATGGCTGATATTGAAGGCATAGAGCATGCAATGAGCCACTCAA TACCAAAGGTGGGCGGCATGGTACTGTTTTTCCCATTAATATCTGTAATGATGCTAGCGGGCAATGTCAAGATGGGTTTA GCTGTAATTATTCCATCTATTTTAAGCTTTATATTTATACCTTTATCTAAAAAATATCAGGTTAATGGACAGAATAGATA TTATGATGTCTTAAGAAAAAACTCAGAAAGCTTTCAAGAAAATATCGAAATGCAAATGGAGATTAAAGCATATAATTTAT CGAAGGATATTAAAGATGACTTATATAAAAAAATGGAAGATAGTGAGAGAGTACACTTAAAGGCGGAAGTAACTACAATT TTAACTTTGTCTATATCTTCAATATTTAGCTTTATATCTCTTGCTGTTGTGATATTTGTCGGCGTAAATCTAATTATTAA TAAAGAGATAAATTCTCTCTACCTTATAGGATATTTACTAGCTGCTATGAAGATAAAAGACTCTTTAGATGCATCTAAAG AGGGCTTGATGGAAATATTTTATTTATCGCCCAAAATAGAAAGATTAAAAGAAATTCAAAATCAAGATTTACAAGAAGGC GATGACTATAGCTTAAAAAAATTTGATATTGATCTAAAAGATGTTGAGTTTGCCTACAATAAAGACGCAAAAGTTTTAAA TGGTGTAAGTTTTAAAGCTAAGCAGGGAGAGGTCACTGCTTTGGTAGGTGCAAGTGGCTGCGGTAAAACAACTATCTTGA AACTTATATCAAGACTTTATGATTATGACAAGGGACAAATCTTAATCGATGGCAAAGATATAAAAGAAATATCAACAGAA TCTCTTTTTGATAAGGTCTCTATAGTTTTCCAAGATGTGGTTCTCTTTAATCAAAGCGTTATGGAAAATATTAGAATCGG AAAGCAAGATGCAAGTGACGAAGAGGTTAAAAGAGCAGCAAAACTTGCAAATTGCACAGATTTTATAGAAAAAATGGATA AAGGTTTCGATACAGTTATTGGTGAGAACGGAGCTGAGCTATCAGGAGGAGAAAGACAAAGATTATCAATAGCCAGAGCC TTCTTAAAAGATGCGCCGATATTGATCTTAGATGAGATAACAGCAAGCCTTGATGTTAACAACGAGAAAAAGATTCAAGA GTCTTTAAATAATTTAGTTAAAGATAAAACTGTTGTAATCATTTCACATAGAATGAAATCCATAGAAAATGCAGACAAGA TAGTAGTTCTTCAAAACGGAAGAGTAGAAAGCGAAGGTAAGCATGAAGAGCTTTTACAAAAATCAAAAATTTACAAAAAT TTAATAGAAAAGACAAAAATGGCAGAAGAATTTATTTATTAG Protein sequence : MKEFYKKRFALTDGGARNLSKATLASFFVYCINMLPAILLMIFAQEVLENMGKSNGFYIVFSVLTLIAMYILLSIEYDKL YNTTYQESADLRIRTAENLSKLPLSYFSKHDISDISQTIMADIEGIEHAMSHSIPKVGGMVLFFPLISVMMLAGNVKMGL AVIIPSILSFIFIPLSKKYQVNGQNRYYDVLRKNSESFQENIEMQMEIKAYNLSKDIKDDLYKKMEDSERVHLKAEVTTI LTLSISSIFSFISLAVVIFVGVNLIINKEINSLYLIGYLLAAMKIKDSLDASKEGLMEIFYLSPKIERLKEIQNQDLQEG DDYSLKKFDIDLKDVEFAYNKDAKVLNGVSFKAKQGEVTALVGASGCGKTTILKLISRLYDYDKGQILIDGKDIKEISTE SLFDKVSIVFQDVVLFNQSVMENIRIGKQDASDEEVKRAAKLANCTDFIEKMDKGFDTVIGENGAELSGGERQRLSIARA FLKDAPILILDEITASLDVNNEKKIQESLNNLVKDKTVVIISHRMKSIENADKIVVLQNGRVESEGKHEELLQKSKIYKN LIEKTKMAEEFIY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0584 | NP_814349.1 | ABC transporter ATP-binding protein/permease | Not tested | Not named | Protein | 2e-175 | 64 |
| ef0102 | AAM75305.1 | EF0102 | Not tested | Not named | Protein | 2e-175 | 64 |
