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Name : SPD_1263 (SPD_1263) Accession : YP_816729.1 Strain : Streptococcus pneumoniae D39 Genome accession: NC_008533 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 1291017 - 1292771 bp Length : 1755 bp Strand : + Note : equivalent gene in S.pneumoniae TIGR4 = SP1434; equivalent gene in S.pneumoniae R6 = spr1289; identified by match to protein family HMM PF00005 DNA sequence : ATGAAGATTTACAAAAAACTATTTGCTTATGTCCAAGATAAGAAATATCTTGGGGTTTTGGCCATAATTTTTTCTGCTAT ATCTGCTCTACTTACAGTATATGGATATTATTTAATCTACAAATTTCTAGATAAGTTAATAATTAATTCAAATTTATCCG GTGCAGAGAGTATAGCATTAAAATCTGTTATTACACTAACAAGTGGAGCGATATTTTATTTTGTCTCAGGAATGTTTTCA CATATCTTGGGATTCAGGCTTGAAACAAATTTAAGAAAAAGGGGAATCGATGGTCTGGAAAAAGCAAGTTTTAGGTTCTT TGACTTAAATCCATCTGGTCAAATAAGAAAGATCATAGATGATAATGCAGCACAAACTCATCAGGTGGTAGCACACATGA TTCCCGATAGTTCTCAGGCAATAATCACACCCGTACTTGTACTTGCACTTGGCTTTATAGTAAGTATAAGAGTTGGCATA ATTTTGCTTGCTCTTACTATAATTGGCGGCTTAATTTTAGGGGCAATGATGGGCGAGCAAGAATTTATGAAGATATACCA AGAATCCCTATCTAAACTAAGTGCTGAAACTGTTGAGTACGTGAGAGGAATGCAAGTTGTAAAAATATTTAAAGCAAATG TAGAGTCTTTTAAAAGCTTTTATAAGGCGATAAAAGATTACTCAAAGTATGCTTATGATTATTCCCTATCTTGTAAAAGG CCTTATGTTTTGTATCAATGGTTATTTTTTGGACTGATTGCAATTTTAATTATTCCTATAGTTTATTTTATGACTAGCTT AGCTAGCGCAAAGGTGATTTTACTTGAGCTTATCATGATTTTATTTTTATCAGGAGTTCTCTTTGTTTCATTCATGAGAA TGATGTGGTACTCCATGTATATTTCTCAAGGAAATTATGCAGTAGATACTTTAGAGGCGCTTTACGAAGATATGCAAAAA GACAAATTAGTGCATGGTAATATCAATAATTTTAAAAACTATAATATAGAATTTGAGAATGTTAGCTTTGCTTATAATGA TAAAGCTGTCATTGAAAATTTATCCTTTAATTTAGAAGAAGGAAAGTCCTACGCACTTGTCGGTTCATCTGGATCAGGCA AATCAACAGTAGCAAAACTTATATCAGGTTTTTATAATGTTAATAAAGGAAGCATAAAGATAGGCGGGATAGCAATAAGT GAATATTCTGACGAAGCCTTAATTAAAGCCATTTCCTTTGTTTTTCAAGATTCAAAATTATTCAAGAAGAGCATTTATGA TAATGTAGCTTTAGCTAATAAAGATGCGACGAAAGATGACGTTATGAGAGCCTTAAAATTAGCAGGATGCGATTTAATAT TAGACAAATTCCCAGAAAGAGAAAATACAATCATAGGCTCAAAAGGTGTTTATTTATCCGGTGGAGAAAAACAAAGAATT GCAATTGCTAGAGCAATTTTAAAGGATTCCAAAATTATTATTATGGATGAAGCATCAGCATCTATTGACCCAGATAACGA GTTTGAATTGCAAAAAGCTTTTAAAAATCTTATGAAGGATAAAACAGTTATCATGATTGCACACAGGCTATCTACAATTA AAGACCTTGATGAAATTATTGTCATGGATAGTGGAAAAATTATAGAAAGAGGGTCTGACAAAGAATTAATGTCAAAAGAT ATAAGGTATAAGAGCCTGCAAGAGATGTTTAACAGTGCGAATGAATGGAGGGTTTCAAATGAAAGAGTTTTATAA Protein sequence : MKIYKKLFAYVQDKKYLGVLAIIFSAISALLTVYGYYLIYKFLDKLIINSNLSGAESIALKSVITLTSGAIFYFVSGMFS HILGFRLETNLRKRGIDGLEKASFRFFDLNPSGQIRKIIDDNAAQTHQVVAHMIPDSSQAIITPVLVLALGFIVSIRVGI ILLALTIIGGLILGAMMGEQEFMKIYQESLSKLSAETVEYVRGMQVVKIFKANVESFKSFYKAIKDYSKYAYDYSLSCKR PYVLYQWLFFGLIAILIIPIVYFMTSLASAKVILLELIMILFLSGVLFVSFMRMMWYSMYISQGNYAVDTLEALYEDMQK DKLVHGNINNFKNYNIEFENVSFAYNDKAVIENLSFNLEEGKSYALVGSSGSGKSTVAKLISGFYNVNKGSIKIGGIAIS EYSDEALIKAISFVFQDSKLFKKSIYDNVALANKDATKDDVMRALKLAGCDLILDKFPERENTIIGSKGVYLSGGEKQRI AIARAILKDSKIIIMDEASASIDPDNEFELQKAFKNLMKDKTVIMIAHRLSTIKDLDEIIVMDSGKIIERGSDKELMSKD IRYKSLQEMFNSANEWRVSNERVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0583 | NP_814348.1 | ABC transporter ATP-binding protein/permease | Not tested | Not named | Protein | 2e-169 | 63 |
| ef0101 | AAM75304.1 | EF0101 | Not tested | Not named | Protein | 2e-169 | 63 |
